# Identification of a novel NKX2-5 variant in a young Ecuadorian patient with atrioventricular block and bradycardia: a case report

**Authors:** Viviana A. Ruiz-Pozo, Santiago Cadena-Ullauri, Elius Paz-Cruz, Rafael Tamayo-Trujillo, Patricia Guevara-Ramirez, Paul Onofre-Ruiz, Ana Karina Zambrano

PMC · DOI: 10.3389/fcvm.2025.1552423 · Frontiers in Cardiovascular Medicine · 2025-04-04

## TL;DR

A young Ecuadorian child with heart rhythm issues was found to have a new genetic variant in the NKX2-5 gene, which may be linked to their condition.

## Contribution

A novel missense variant in NKX2-5 is identified in a mestizo patient with AV block and bradycardia, emphasizing the role of genomic and ancestral analysis in personalized diagnostics.

## Key findings

- A missense variant p.(Tyr274Ser) in NKX2-5 was identified in a young Ecuadorian patient with AV block and bradycardia.
- The patient's genetic background includes 16.5% African, 45.9% European, and 37.6% Native American ancestry.
- The variant is classified as a variant of uncertain significance (VUS), suggesting a potential link to the patient's cardiac phenotype.

## Abstract

Cardiovascular diseases (CVDs) are the leading global cause of mortality, with South America reflecting similar trends. Among congenital heart diseases (CHDs), atrioventricular (AV) block is included. AV block is a condition defined by abnormal electrical signal transmission between the atria and ventricles. Advances in Next-Generation Sequencing (NGS) have facilitated the identification of genetic variants associated with cardiac disorders, such as AV block. Notably, the transcription factor NKX2-5 plays a crucial role in heart development and function, and mutations in this gene have been linked to bradycardia and AV block. This article describes the case report of a young Ecuadorian child diagnosed with AV block and bradycardia. Furthermore, by performing NGS, a missense variant, p.(Tyr274Ser) substitution, in the NKX2-5 gene has been identified and classified as a variant of uncertain significance (VUS). Ancestral analysis has shown a genetic background of 16.5% African, 45.9% European, and 37.6% Native American. These findings suggest a potential association between the identified NKX2-5 variant and the patient's phenotype, highlighting the importance of integrating genomic and ancestral analyses to advance personalized diagnostics and therapeutics in diverse populations, such as the mestizo population.

## Linked entities

- **Genes:** NKX2-5 (NK2 homeobox 5) [NCBI Gene 1482]
- **Diseases:** atrioventricular block (MONDO:0000465)

## Full-text entities

- **Genes:** NKX2-5 (NK2 homeobox 5) [NCBI Gene 1482] {aka CHNG5, CSX, CSX1, HLHS2, NKX2.5, NKX2E}
- **Diseases:** bradycardia (MESH:D001919), CHDs (MESH:D006330), cardiac disorders (MESH:D006331), AV block (MESH:D054537), CVDs (MESH:D002318)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** p.(Tyr274Ser)

## Full text

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## Figures

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## References

37 references — full list in the complete paper: https://tomesphere.com/paper/PMC12006191/full.md

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Source: https://tomesphere.com/paper/PMC12006191