Progression of HIV-1 CKDs: Viral Load Versus APOL1 Risk Alleles
Patricio E. Ray

Abstract
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TopicsRenal Diseases and Glomerulopathies · Chronic Lymphocytic Leukemia Research · Chronic Kidney Disease and Diabetes
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People living with HIV-1 of sub-Saharan West African ancestry develop chronic kidney diseases (CKDs) more frequently than other groups with or without HIV-1 infection.1^,^2 A large fraction of this disparity is explained by 2 coding sequence variants in the APOL1 gene known as G1 and G2, which are associated with focal segmental glomerulosclerosis, HIV-associated nephropathy (HIVAN), and hypertension attributed end-stage kidney diseases.3 How the APOL1 risk alleles (RAs) affect the development of hypertension, cardiovascular diseases (CVDs), and CKD only in people living with HIV-1 on antiretroviral therapies (ART) is unclear at the present time. In this issue of the journal, Tassiopoulos et al. explored the associations between the APOL1 RAs and hypertension, CVD and CKD in Black adult persons with HIV (n = 1194) who were followed-up for up to 20 years.4 As expected, they found that their estimated glomerular filtration rate (eGFR) declined more significantly in people carrying 2 copies of the APOL1 RAs (G1/G1, G2/G2, or G1/G2) and was greater in those who did not achieve sustained viral suppression. A similar association was noted in those carrying only 1 copy of the APOL1 RAs during the second decade of follow-up. In contrast, no associations between the APOL1 RAs and hypertension or CVD incidents were found.
A significant contribution of Tassiopoulos et al. was their exclusive focus on Black adults living with HIV on ART and the finding that those carrying only 1 copy of the RAs were at higher long-term risk of developing CKD.4 Their findings support the results of a previous study that showed that the odds ratios for developing HIVAN in people carrying 2 copies of the APOL1 RAs were 29 (95% confidence interval:13–68), whereas carrying 1 G1 allele showed a marginal significant association (odds ratio: 1.9, 95% confidence interval:1.01–3.5), and those with a single copy of the G2 allele showed no significant association.5 The latter HIVAN study however, included people followed-up during the early years of the AIDS epidemic who did not benefit from the new ART; therefore, the frequency and severity of HIV-CKD in this group were much higher.5 As expected, Tassiopoulos et al. showed that the renal effects of the APOL1 RAs were modulated by the viral load.4 However, sustained viral suppression (defined by an HIV-RNA < 200 copies/ml for > 90% of follow-up time) reduced, but did not eliminate the association of the RAs with the eGFR decline. These results are in agreement with the notion that a high viral load is the major factor affecting the progression of HIV-CKD. Nonetheless, whether a high viral load plays such role by activating the innate immune response leading to the release of INF-γ and TNF-α that increase the expression and cytotoxicity of APOL1 in podocytes and renal endothelial cells, or by facilitating the infection of renal epithelial cells, or both processes,6 are still open questions that warrant further investigation. Finally, their findings strongly suggest that the APOL1-G0 genotype did not provide a protective effect against HIV-CKD, given that the estimated GFR declined in people carrying 1 RA, further supporting the notion that the APOL1 RAs are gain-of-function mutations.
There are several caveats that are worth taken into consideration when interpreting the study of Tassiopoulos et al. First, proteinuria was not assessed in all participants; thus, the diagnosis of CKD was based on estimated GFR criteria only. It is worth mentioning that most people in the sustained viral suppression group showed mean estimated GFR levels above the CKD threshold of 60 ml/min per 1.73 m^2^ regardless of the number of APOL1 RAs. Furthermore, the association of the APOL1 RAs with proteinuria was eliminated in the sustained viral suppression group, whereas participants carrying the APOL1 RAs in the nonsustained viral suppression groups showed more severe proteinuria. Taking together, these findings confirm that the viral load is the critical factor determining the progression of HIV-CKD (Figure 1). It is worth mentioning here that people of sub-Saharan West African ancestry carrying 2 G0 alleles can develop HIVAN, albeit less frequently.5 Thus, other factors associated with sub-Sharan West African ancestry should play additional roles in HIVAN. Second, people who developed hypertension during the study period (31%, n = 267) had other risk factors for hypertension, including older age, higher body mass indexes, diabetes, and/or having received tenofovir disoproxil fumarate as a part of their initial ART regimen, making it more difficult to define the specific role of APOL1. Alternatively, the lack of association between the APOL1 RAs and hypertension suggests that either the GFR decline was not enough to affect the blood pressure, or that some participants were undergoing the early stages of HIVAN. People undergoing the earlier stages of HIVAN do not typically develop hypertension despite multiple risk factors to do so.This finding can be explained, at least partially, by the tubulointerstitial lesions of HIVAN, which induce salt wasting states in humans and HIV-Tg mice.6^,^8 Early HIVAN and salt-losing tubulopathies are difficult to detect if proteinuria and other urinary losses are not monitored on a regular basis. Third, the number of people who developed a CVD incident was too small to reach definitive conclusions (2.7%, n = 31) and these people were older by a median of 12 years as well as more likely to have hypertension or a family history of CVD.Figure 1HIV-1 and the APOL1 risk alleles interact to precipitate the progression of HIV-CKD in Black adults on ART. Carriers of 2 copies of the APOL1 risk alleles with higher viral loads showed more significant proteinuria and estimated GFR declines and may have the highest long-term risk for developing hypertension and/or CVD in association with the progression of HIV-CKD. Carriers of a single copy of the G1 risk allele with higher viral loads showed more significant GFR declines when compared with those with sustained viral suppression. It remains unclear whether carriers of a single copy of the G2 risk allele will show similar outcomes than carriers of 1 copy of the G1 risk allele. People coinheriting the APOL1 p.N264 missense variant with either 2 or 1 copy of the G2 allele may have a similar risk of CKD than those carrying 2 copies of the APOL1-G0 alleles.7 ART, antiretroviral therapy; CKD, chronic kidney disease; CVD, cardiovascular disease; GFR, glomerular filtration rate; HTN, hypertension.
It is worth discussing here that the criteria used to define sustained viral suppression included participants who had persistent low-level viremia, defined by the World Health Organization as an HIV-RNA viral load between 51 and 999 HIV RNA copies/ml.9 A suppressed viral load, defined as an HIV-RNA viral load < 50 copies/ml, means that the virus is not replicating at detectable levels and therefore is considered the hallmark of successful treatments.9 Conversely, the virus continues to replicate in people with persistent low-level viremia, and these persons are more likely to develop virological failure, immune activation, microbial translocation, systemic inflammation, and have worse clinical outcomes relative to those with a suppressed viral load.9 A persistent low-level viremia indicates that people may have poor adherence, drug resistance, or hyperactive viral reservoirs.9 The latter can be identified using molecular virology tests to detect viruses undergoing clonal expansion. All these issues should be considered when following people living with HIV-1. Further studies are needed to define what viral load suppression levels are needed to prevent CKD in carriers of the APOL1 RAs relative to those at lesser risk.
Finally, recent studies showed that the APOL1 p.N264 missense variant, when coinherited with the G2 APOL1 RA, significantly reduced the penetrance of the G1/G2 and G2/G2 RAs by converting them to a low-risk genotype7 (Figure 1). This protective effect, which was not seen with the G1 or G1/G1 risk genotype, may explain the lack of association between the G2 RA and HIVAN discussed earlier. Thus, it remains to be determined whether people living with HIV-1 carrying 1 copy of the G2 allele are at a similar risk of GFR decline compared to those carrying 1copy of the G1 allele. Notably, APOL1-G1 is the RA more frequently associated with HIVAN.2 In conclusion, Tassiopoulos et al. showed that the APOL1 RAs play a role in enhancing the progression of HIV-CKD, underscoring the importance of suppressing the viral load to ameliorate this process in Black adults on ART.4 Their study will hopefully stimulate further research to define the best way of accomplishing this goal.
Disclosure
The author declared no competing interests.
The reference list from the paper itself. Each links out to its DOI / PubMed record.
- 1Jose S.Hamzah L.Jones R.Chronic kidney disease risk in African and Caribbean populations with HIVJ Infect Dis 21820181767177210.1093/infdis/jiy 39729982487 PMC 6195659 · doi ↗ · pubmed ↗
- 2Kasembeli A.N.Duarte R.Ramsay M.APOL 1 risk variants are strongly associated with HIV-associated nephropathy in Black South Africans J Am Soc Nephrol 2620152882289010.1681/ASN.201405046925788523 PMC 4625661 · doi ↗ · pubmed ↗
- 3Genovese G.Friedman D.J.Ross M.D.Association of trypanolytic Apo L 1 variants with kidney disease in African Americans Science 329201084184510.1126/science.119303220647424 PMC 2980843 · doi ↗ · pubmed ↗
- 4Tassiopoulos K.K.Wu K.Wu Z.Overton E.T.Apol 1 genotype and HIV infection: 20-year outcomes for CKD, cardiovascular disease, and hypertension Kindey Int Rep 10202585586510.1016/j.ekir.2024.12.022 · doi ↗
- 5Kopp J.B.Nelson G.W.Sampath K.APOL 1 genetic variants in focal segmental glomerulosclerosis and HIV-associated nephropathy J Am Soc Nephrol 2220112129213710.1681/ASN.201104038821997394 PMC 3231787 · doi ↗ · pubmed ↗
- 6Ray P.E.Li J.Das J.Xu L.Yu J.Han Z.Pathogenesis of HIV-associated nephropathy in children and adolescents: Taking a hard look 40 years later in the era of gene-environment interactions Am J Physiol Ren Physiol 3272024 F 1049 F 106610.1152/ajprenal.00208.2024 PMC 1168783339323389 · doi ↗ · pubmed ↗
- 7Gupta Y.Friedman D.J.Mc Nulty M.Strong protective effect of the APOL 1 p.N 264K variant against G 2-associated focal segmental glomerulosclerosis and kidney disease Nat Commun 14202378363803652310.1038/s 41467-023-43020-9PMC 10689833 · doi ↗ · pubmed ↗
- 8Shrivastav S.Lee H.Okamoto K.HIV-1 Vpr suppresses expression of the thiazide-sensitive sodium chloride co-transporter in the distal convoluted tubule P Lo S One 172022 e 027331310.1371/journal.pone.0273313 PMC 949155036129874 · doi ↗ · pubmed ↗
