# Limited Diversity of Thermal Adaptation to a Critical Temperature in Zymomonas mobilis: Evidence from Multiple-Parallel Laboratory Evolution Experiments

**Authors:** Sornsiri Pattanakittivorakul, Shun Kato, Takashi Kuga, Tomoyuki Kosaka, Minenosuke Matsutani, Masayuki Murata, Morio Ishikawa, Kankanok Charoenpunthuwong, Pornthap Thanonkeo, Mamoru Yamada

PMC · DOI: 10.3390/ijms26073052 · International Journal of Molecular Sciences · 2025-03-26

## TL;DR

This study shows that different Zymomonas mobilis mutants adapted to higher temperatures use similar genetic strategies, suggesting limited diversity in thermal adaptation.

## Contribution

The study identifies common molecular mechanisms underlying thermal adaptation in multiple independently evolved Zymomonas mobilis mutants.

## Key findings

- Two mutations in each mutant primarily contributed to increased thermal resistance.
- Common mechanisms include altered diacylglycerol kinase activity and upregulated GroEL/GroES or cell wall hydrolase genes.
- Transporters like efflux pumps may help maintain cellular homeostasis at high temperatures.

## Abstract

Laboratory evolution is an effective means of understanding microbial adaptation to the environment. We previously isolated four thermoadapted Zymomonas mobilis mutants, which showed a 2 °C rise in the critical high temperature (CHT), by performing multiple-parallel adaptation experiments. In the present study, the individual mutations in these mutants were intensively analyzed. Two mutations in each adapted mutant were found to primarily contribute to the increase in the upper temperature limit. RNA sequencing (RNA-seq) analysis revealed that the two mutations led to the upregulation of 79–185 genes and the downregulation of 242–311 genes. The findings from transcriptomic and physiological experiments suggest two common and primary mechanisms for thermal resistance: a decrease in the activity of diacylglycerol kinase, which may change the structure of lipopolysaccharide (LPS) probably to strengthen the membrane structure, and an increase in the expression of genes for GroEL/GroES or cell wall hydrolase to repair the protein or membrane damage that occurs at such critical temperatures. Additionally, transporters including efflux pumps may contribute to intracellular homeostasis by expelling toxic compounds such as ethanol and acetate or by maintaining the K+ concentration. The results of this study on four independently thermoadapted mutants led to the conclusion that the mutants have almost the same thermal adaptation strategies and thus their molecular diversity is limited.

## Linked entities

- **Genes:** HSPD1 (heat shock protein family D (Hsp60) member 1) [NCBI Gene 3329], HSPE1 (heat shock protein family E (Hsp10) member 1) [NCBI Gene 3336]
- **Chemicals:** ethanol (PubChem CID 702), acetate (PubChem CID 175), K+ (PubChem CID 813)
- **Species:** Zymomonas mobilis (taxon 542)

## Full-text entities

- **Species:** Zymomonas mobilis (species) [taxon 542]

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11989028/full.md

## References

46 references — full list in the complete paper: https://tomesphere.com/paper/PMC11989028/full.md

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Source: https://tomesphere.com/paper/PMC11989028