# Identification of new candidate drugs in myelodysplastic syndromes with splicing factor mutations by transcriptional profiling and connectivity map analysis

**Authors:** Tianyu Sun, Shalini Singh, Hayson Chenyu Wang, Juseong Lee, Hamid Dolatshad, Pak Leng Cheong, Douglas R. Higgs, Jacqueline Boultwood, Andrea Pellagatti

PMC · DOI: 10.1111/bjh.20026 · British Journal of Haematology · 2025-02-23

## TL;DR

This paper identifies two potential new drugs, Celastrol and Withaferin A, that could treat myelodysplastic syndromes by targeting specific cell signaling pathways.

## Contribution

The novel contribution is the identification of Celastrol and Withaferin A as candidate drugs for MDS through transcriptional profiling and connectivity map analysis.

## Key findings

- Celastrol and Withaferin A inhibit proliferation and induce apoptosis in leukemia cells.
- These compounds inhibit viability of primary bone marrow MDS cells.
- They block IL-1 receptor-associated kinase 4-mediated NF-κB signaling activation in MDS and leukemia cells.

## Abstract

We sought to identify new candidate drugs for repurposing to myelodysplastic syndromes (MDS). Connectivity map analysis was performed on gene expression signatures generated from bone marrow CD34+ cells of splicing factor mutant MDS patients. Celastrol and Withaferin A (WA), two top‐ranking compounds identified, markedly inhibited proliferation, arrested the cell cycle and induced apoptosis in leukaemia cells. These compounds also inhibited the viability of primary bone marrow MDS cells. We showed that Celastrol and WA inhibit interleukin‐1 receptor‐associated kinase 4‐mediated nuclear factor kappa‐light‐chain‐enhancer of activated B cells signalling activation in splicing factor mutant MDS and leukaemia cells. Celastrol and WA may represent novel candidate drugs for the treatment of MDS.

## Linked entities

- **Chemicals:** Celastrol (PubChem CID 122724), Withaferin A (PubChem CID 265237)
- **Diseases:** myelodysplastic syndromes (MONDO:0018881), leukaemia (MONDO:0004355)

## Full-text entities

- **Genes:** IRAK4 (interleukin 1 receptor associated kinase 4) [NCBI Gene 51135] {aka IMD67, IPD1, IRAK-4, NY-REN-64, REN64}, CD34 (CD34 molecule) [NCBI Gene 947]
- **Diseases:** MDS (MESH:D009190), leukaemia (MESH:D015458)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

17 references — full list in the complete paper: https://tomesphere.com/paper/PMC11985364/full.md

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Source: https://tomesphere.com/paper/PMC11985364