# Functional analysis of a novel FBN1 deep intronic variant causing Marfan syndrome in a Chinese patient

**Authors:** Qingming Wang, Fang Zhang, Xinlong Zhou, Hui Li, Juan Zhao, Haiming Yuan

PMC · DOI: 10.3389/fgene.2025.1564824 · Frontiers in Genetics · 2025-03-19

## TL;DR

A new deep intronic variant in the FBN1 gene is found to cause Marfan syndrome in a Chinese patient, expanding the known mutation spectrum.

## Contribution

The study identifies and functionally validates a novel FBN1 deep intronic variant causing Marfan syndrome.

## Key findings

- A novel de novo deep intronic variant in FBN1 was identified in a Chinese patient with Marfan syndrome.
- The variant causes exon 41 skipping, leading to a 41-amino acid deletion and confirming its pathogenicity.

## Abstract

Marfan syndrome (MFS MIM#154700), due to pathogenic variants in the FBN1 gene, is an autosomal dominant connective tissue disorder, typically involving the skeletal, cardiovascular and ocular systems. Currently, over 3000 MFS patients were reported, and approximately 1800 pathogenic variants in FBN1 were identified. However, the molecular diagnosis still remains challenging for 8%–10% of patients with clinical features suggestive of MFS. In this study, we reported a 2-month-old Chinese female patient whose clinical features were compatible with the MFS. Whole-exome sequencing (WES) identified a novel de novo deep intronic variant, c.4943-8_4943-7insTATGTGATATTCAT TCAC in intron 40 of FBN1 that was predicted to affect the RNA splicing. Minigene analysis showed that this variant causes skipping of exon 41, leading to the deletion of 41 amino acids (c.4943_5065del, p.Val1649_Asp1689del). It confirmed the pathogenic nature of the variant and established the genotype-phenotype relationship. Our study expands the mutation spectrum of FBN1 and emphasizes the importance of deep intronic variant interpretation and the need for additional functional studies to verify the pathogenicity of these variants.

## Linked entities

- **Genes:** FBN1 (fibrillin 1) [NCBI Gene 2200]
- **Diseases:** Marfan syndrome (MONDO:0007947)

## Full-text entities

- **Genes:** FBN1 (fibrillin 1) [NCBI Gene 2200] {aka ACMICD, ECTOL1, FBN, GPHYSD2, MASS, MFLS}
- **Diseases:** autosomal dominant connective tissue disorder (MESH:D003240), MFS (MESH:D008382)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.4943_5065del, p.Val1649_Asp1689del, c.4943-8_4943-7insTATGTGATATTCAT

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11962022/full.md

## References

27 references — full list in the complete paper: https://tomesphere.com/paper/PMC11962022/full.md

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Source: https://tomesphere.com/paper/PMC11962022