# Novel variants of SYNGAP1 associated epileptic encephalopathy: two cases report and literature review

**Authors:** Xingying Zeng, Yong Chen, Xiongying Yu, Yuanyuan Che, Hui Chen, Zhaoshi Yi, Jie Qin, Jianmin Zhong

PMC · DOI: 10.1186/s42494-022-00114-z · 2023-02-21

## TL;DR

Two children with SYNGAP1 gene mutations developed developmental delays and seizures, and treatment with drugs like valproic acid and prednisone helped control their symptoms.

## Contribution

Reports two novel SYNGAP1 mutations and suggests potential treatment efficacy for associated epileptic encephalopathy.

## Key findings

- Two novel SYNGAP1 mutations were identified in children with developmental delay and seizures.
- Valproic acid and prednisone treatment led to seizure control in the patients.
- The mutations were de novo and not inherited from parents.

## Abstract

SYNGAP1 is a significant genetic risk factor for global developmental delay, autism spectrum disorder, and epileptic encephalopathy. De novo loss-of-function variants in this gene cause a neurodevelopmental disorder, for example, early-onset and drug-refractory seizures. We report two children with global developmental delay and epileptic encephalopathy, which are caused by SYNGAP1 gene novel mutations, and drug treatment is effective.

We report a boy and a girl presented with global developmental delay when they were young babies; as they grew up, cognitive impairment and social-communication disorder became more and more prominent; unfortunately, the patients developed into various seizure types, including eyelid myoclonia, myoclonic and absences when the boy was 1 year 8 mouths old and the girl was 3 years old. The two patients were found two previously unknown mutations by high throughput sequencing [c.3271_ c.3272insT; (p.L1091L fs*62), c.2515A > T (p.K839*)] in exon 15 of the SYNGAP in the proband. Sanger sequencing confirmed the heterozygous nature, and neither of their parents carried the same mutation. The girl treated with valproic acid and prednisone became seizure-free, and valproic acid and levetiracetam combined with clonazepam were influential in the other.

The global developmental delay and epileptic encephalopathy of the children were probably due to the pathogenic mutation of the SYNGAP1 gene, and prednisone and clonazepam may be effective in achieving seizure-free.

## Linked entities

- **Genes:** SYNGAP1 (synaptic Ras GTPase activating protein 1) [NCBI Gene 8831]
- **Chemicals:** valproic acid (PubChem CID 3121), prednisone (PubChem CID 5865), levetiracetam (PubChem CID 5284583), clonazepam (PubChem CID 2802)
- **Diseases:** autism spectrum disorder (MONDO:0005258)

## Full-text entities

- **Genes:** SYNGAP1 (synaptic Ras GTPase activating protein 1) [NCBI Gene 8831] {aka MRD5, RASA5, SYNGAP}
- **Diseases:** autism spectrum disorder (MESH:D000067877), myoclonic and absences (MESH:D004831), cognitive impairment (MESH:D003072), eyelid myoclonia (MESH:D005141), seizure (MESH:D012640), developmental delay (MESH:D002658), epileptic encephalopathy (MESH:D001927), social-communication disorder (MESH:D000067404)
- **Chemicals:** prednisone (MESH:D011241), clonazepam (MESH:D002998), levetiracetam (MESH:D000077287), valproic acid (MESH:D014635)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** c.3271_ c.3272insT, p.K839*, c.2515A > T, p.L1091L fs*62

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11960226/full.md

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Source: https://tomesphere.com/paper/PMC11960226