# MEOX1-mediated transcriptional regulation of circABHD3 exacerbates hepatic fibrosis through promoting m6A/YTHDF2-dependent YPEL3 mRNA decay to activate β-catenin signaling

**Authors:** Limin Chen, Hui Yang, Juan Wang, Haoye Zhang, Kangkang Fu, Yu Yan, Zhenguo Liu

PMC · DOI: 10.1371/journal.pgen.1011622 · PLOS Genetics · 2025-03-18

## TL;DR

This study reveals that a circular RNA called circABHD3 worsens liver fibrosis by promoting cell changes and signaling pathways linked to liver damage.

## Contribution

The study identifies a novel regulatory mechanism involving circABHD3, MEOX1, and YTHDF2 in hepatic fibrosis through m6A modification and β-catenin signaling.

## Key findings

- CircABHD3 is upregulated in fibrotic liver models and patients, and its knockdown reduces fibrosis markers and EMT.
- MEOX1 promotes circABHD3 transcription, which destabilizes YPEL3 mRNA via YTHDF2 to activate β-catenin signaling.
- Inhibiting circABHD3 in vivo reduces liver fibrosis by suppressing EMT and β-catenin signaling.

## Abstract

Hepatic fibrosis may progress to liver cirrhosis and eventually cause death. Epithelial-mesenchymal transition (EMT) of hepatocytes plays critical roles in hepatic fibrosis. Exploring the mechanisms underlying EMT is crucial for a better understanding of hepatic fibrosis pathogenesis.

Hepatocyte EMT wad induced with TGF-β1 and evaluated by Western blotting and immunofluorescence staining. Methylated RNA immunoprecipitation (MeRIP) was applied to assess N6-methyladenosine (m6A) modification. RIP and RNA pull-down assays were performed to analyze the interaction between circABHD3, YTHDF2 and YPEL3 mRNA. MEOX1-mediated transcription of ABHD3 was examined by luciferase and chromatin immunoprecipitation (ChIP). Mice were intraperitoneally injected with CCl4 or treated with bile duct ligation (BDL) surgery for hepatic fibrosis induction. Liver injury and collagen deposition were examined with hematoxylin and eosin (HE), Masson, and Sirius Red staining. Alanine transaminase (ALT), aspartate transaminase (AST) and hydroxyproline (HYP) were examined using ELISA.

CircABHD3 was upregulated in in vitro and in vivo models of hepatic fibrosis and patients. Knockdown of circABHD3 inhibited TGF-β1-induced expression of fibrosis markers, EMT and mitochondrial impairment in hepatocytes. MEOX1 could directly bind to the promoter of ABHD3 to facilitate its transcription and subsequent circABHD3 generation. Knockdown of MEOX1 suppressed TGF-β1-induced EMT and mitochondrial impairment through suppression of circABHD3. CircABHD3 destabilized YPEL3 mRNA via promoting YTHDF2-dependent recognition of m6A-modified YPEL3 mRNA to trigger β-catenin signaling activation. Furthermore, circABHD3 silencing-mediated inhibition of EMT and mitochondrial impairment was counteracted by YPEL3 knockdown and activation of β-catenin signaling. Depletion of circABHD3 significantly reduced EMT, mitochondrial impairment and hepatic fibrosis via promoting YPEL3 expression and suppressing β-catenin signaling in vivo.

MEOX1-mediated generation of circABHD3 promotes EMT and mitochondrial impairment by enhancing YTHDF2-mediated degradation of YPEL3 mRNA and activating downstream β-catenin signaling, thus exacerbating hepatic fibrosis.

Hepatic fibrosis is a pathological condition characterized by the excessive deposition of extracellular matrix (ECM) proteins within the liver that leads to liver dysfunction. Epithelial-mesenchymal transition (EMT) is proposed to contribute to fibrogenesis by enabling epithelial cells to acquire a fibroblastic phenotype and participate in the production of ECM components. Understanding the cellular and molecular mechanisms involved in hepatic fibrosis is crucial for the development of effective therapies to prevent or reverse this condition and its associated complications. Here, we describe a novel mechanism involving circular RNA and EMT in liver fibrosis. CircABHD3 promotes EMT and mitochondrial impairment via facilitating YTHDF2-mediated degradation of YPEL3 mRNA and activating downstream β-catenin signaling, thus exacerbating hepatic fibrosis. This finding is particularly important as it provides a novel insight into the pathogenesis of hepatic fibrosis and potential targets for anti-fibrosis treatment.

## Linked entities

- **Genes:** ABHD3 (abhydrolase domain containing 3, phospholipase) [NCBI Gene 171586], MEOX1 (mesenchyme homeobox 1) [NCBI Gene 4222], YPEL3 (yippee like 3) [NCBI Gene 83719], YTHDF2 (YTH N6-methyladenosine RNA binding protein F2) [NCBI Gene 51441], ctnnb1.S (catenin beta 1 S homeolog) [NCBI Gene 380441]
- **Proteins:** TGFB1 (transforming growth factor beta 1), YTHDF2 (YTH N6-methyladenosine RNA binding protein F2), ctnnb1.S (catenin beta 1 S homeolog)
- **Chemicals:** CCl4 (PubChem CID 5943)

## Full-text entities

- **Genes:** ABHD3 (abhydrolase domain containing 3, phospholipase) [NCBI Gene 171586] {aka LABH3}, YPEL3 (yippee like 3) [NCBI Gene 83719], YTHDF2 (YTH N6-methyladenosine RNA binding protein F2) [NCBI Gene 51441] {aka CAHL, DF2, HGRG8, NY-REN-2}, MEOX1 (mesenchyme homeobox 1) [NCBI Gene 4222] {aka KFS2, MOX1}, SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}
- **Diseases:** death (MESH:D003643), collagen (MESH:D003095), Liver injury (MESH:D017093), Hepatic fibrosis (MESH:D008103), fibrosis (MESH:D005355), mitochondrial impairment (MESH:D028361)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11918346/full.md

## References

64 references — full list in the complete paper: https://tomesphere.com/paper/PMC11918346/full.md

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Source: https://tomesphere.com/paper/PMC11918346