# Expression of ENL YEATS domain tumor mutations in nephrogenic or stromal lineage impairs kidney development

**Authors:** Zhaoyu Xue, Hongwen Xuan, Kin Lau, Yangzhou Su, Marc Wegener, Kuai Li, Lisa Turner, Marie Adams, Xiaobing Shi, Hong Wen

PMC · DOI: 10.1038/s41467-025-57926-z · Nature Communications · 2025-03-14

## TL;DR

This study shows how mutations in the ENL protein disrupt kidney development in mice, leading to fatal defects in different cell lineages.

## Contribution

The paper reveals distinct developmental pathways affected by ENL tumor mutations in nephrogenic and stromal lineages.

## Key findings

- Six2-ENLT mutants show reduced nephron tubules and cystic glomeruli, indicating impaired progenitor differentiation.
- Foxd1-ENLT mutants display expanded renal capsule and disrupted stromal-epithelium communication.
- Transcriptomic analyses highlight aberrant Hox and Wnt signaling in ENL mutant nephrogenic cells.

## Abstract

Recurrent gain-of-function mutations in the histone reader protein ENL have been identified in Wilms tumor, the most prevalent pediatric kidney cancer. However, their pathological significance in kidney development and tumorigenesis in vivo remains elusive. Here, we generate mouse models mimicking ENL tumor (ENLT) mutations and show that heterozygous mutant expression in Six2+ nephrogenic or Foxd1+ stromal lineages leads to severe, lineage-specific kidney defects, both resulting in neonatal lethality. Six2-ENLT mutant kidneys display compromised cap mesenchyme, scant nephron tubules, and cystic glomeruli, indicative of premature progenitor commitment and blocked differentiation. Bulk and spatial transcriptomic analyses reveal aberrant activation of Hox and Wnt signaling genes in mutant nephrogenic cells. In contrast, Foxd1-ENLT mutant kidneys exhibit expansion in renal capsule and cap mesenchyme, with dysregulated stromal gene expression affecting stroma-epithelium crosstalk. Our findings uncover distinct pathways through which ENL mutations disrupt nephrogenesis, providing a foundation for further investigations into their role in tumorigenesis.

The histone reader ENL is frequently mutated in Wilms tumor. Here they use mouse models and spatial transcriptomic analyses to show how ENL tumor mutations disrupt nephrogenesis through distinct pathways in nephrogenic and stromal lineages.

## Linked entities

- **Genes:** MLLT1 (MLLT1 super elongation complex subunit) [NCBI Gene 4298], SIX2 (SIX homeobox 2) [NCBI Gene 10736], FOXD1 (forkhead box D1) [NCBI Gene 2297], Ho (Heme oxygenase) [NCBI Gene 41407], Wnt (protein Wnt-2) [NCBI Gene 100641115]
- **Proteins:** MLLT1 (MLLT1 super elongation complex subunit)
- **Diseases:** Wilms tumor (MONDO:0006058)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Mllt1 (myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1) [NCBI Gene 64144] {aka BAM11, ENL, LTG19}, Six2 (sine oculis-related homeobox 2) [NCBI Gene 20472], Foxd1 (forkhead box D1) [NCBI Gene 15229] {aka BF-2, FREAC4, Hfh10, Hfhbf2}
- **Diseases:** tumorigenesis (MESH:D063646), neonatal lethality (MESH:C537510), Wilms tumor (MESH:D009396), ENL tumor (MESH:D009369), kidney cancer (MESH:D007680), kidney defects (MESH:D007674)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11909213/full.md

## References

9 references — full list in the complete paper: https://tomesphere.com/paper/PMC11909213/full.md

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Source: https://tomesphere.com/paper/PMC11909213