Corrigendum: Genetic variation in host-specific competitiveness of the symbiont Rhizobium leguminosarum Symbiovar viciae
Stéphane Boivin, Frederic Mahé, Frédéric Debellé, Marjorie Pervent, Mathilde Tancelin, Marc Tauzin, Jerzy Wielbo, Sylvie Mazurier, Peter Young, Marc Lepetit

Abstract
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Taxonomy
TopicsLegume Nitrogen Fixing Symbiosis · Nematode management and characterization studies · Agronomic Practices and Intercropping Systems
In the published article Mutch et al., 2004, Young et al., 2006, Laguerre et al., 2007; Riah et al., 2014; Reeve et al., 2015, Seshadri et al., 2015, Sánchez-Cañizares et al., 2018; Jorrin et al., 2020 were not cited in the article. The citation has now been inserted in the Result section, first paragraph and should read:
“At the beginning of this study, we collected 73 genome sequences of Fabeae symbionts available in GenBank (Supplementary Table 1). To increase the diversity, the genomes of 48 additional rhizobia from diverse geographical origins, and/or carrying diverse sequences of the symbiotic marker nodD belonging to the symbiovar (sv) viciae, were also sequenced (Supplementary Table 1). All rhizobia have been isolated in previous studies from Pisum sativum, Vicia faba, Lens culinaris, and Lathyrus pratensis root nodules (Supplementary Table 1; Mutch et al., 2004, Young et al., 2006, Laguerre et al., 2007; Riah et al., 2014; Reeve et al., 2015, Seshadri et al., 2015, Sánchez-Cañizares et al., 2018; Jorrin et al., 2020). Most of the bacteria (117/121) shared an Average Nucleotide Identity (ANI) *>*92% (Figure 1, Supplementary Table 8). They belonged to nine of the R. leguminosarum complex (Rlc) genospecies previously described: gsB, gsC, gsD, gsE, gsG, gsN, gSO, gsQ, and gsR (Young et al., 2021). Four other strains were phylogenetically distant from the others (88% < ANI < 90%; Supplementary Table 8) and hence outside the Rlc, but included inside the R. leguminosarum-etli clade according the recent study of Young et al. (2021).”.
In the published article, the respective original sources of the newly 48 sequenced Rlv strains were ambiguous.
A correction has been made to Material and method section, Bacterial Collection, Inoculation and Plant Growth Conditions subsection, first paragraph, first sentence. This sentence previously stated:
“Rhizobia isolated from Pisum sativum, Vicia faba, Lens culinaris, or Lathyrus pratensis root nodules, and from various geographical origins, were collected (Supplementary Table 1)”
The corrected sentence appears below:
“Rhizobia isolated in previous studies by several laboratories from Pisum sativum, Vicia faba, Lens culinaris, or Lathyrus pratensis root nodules, and from various geographical origins, were used in this study (Supplementary Table 1).”
A correction has been made to Aknowledgment section, Bacterial Collection, Inoculation and Plant Growth Conditions subsection, first paragraph, first sentence. This sentence previously stated:
“We acknowledge Markus Braun (Heidelberg University), Xinhua Sui and Changfu Tian (China Agricultural University, Beijing), Anna Skorupska and Andrzej Mazur (Medical University of Lublin), and Juan Imperial (Instituto de Ciencias Agrarias, Madrid) for providing some of the rhizobial strains included in this study, as well as the Genotoul GeT-PlaGe platform of Toulouse for the Illumina MiSeq sequencing.”
The corrected sentence appears below:
“We acknowledge Markus Braun (Heidelberg University), Xinhua Sui and Changfu Tian (China Agricultural University, Beijing), Anna Skorupska and Andrzej Mazur (Medical University of Lublin), Juan Imperial (Instituto de Ciencias Agrarias, Madrid), Nassira Riah (University of Constantine) for providing some of the rhizobial strains included in this study, as well as the Genotoul GeT-PlaGe platform of Toulouse for the Illumina MiSeq sequencing.”
In the published article, there was an error in Supplementary Table 1, the sources of the newly 48 sequenced Rlv strains were not properly detailed.
The authors apologize for these errors and state that this does not change the scientific conclusions of the article in any way. The original article has been updated.
The reference list from the paper itself. Each links out to its DOI / PubMed record.
- 1Jorrin B.Palacios J. M.PeixÁ.Imperial J. (2020). Rhizobium ruizarguesonis sp. nov., isolated from nodules of Pisum sativum L. System. Appl. Microbiol. 43, 126090. doi: 10.1016/j.syapm.2020.126090 32690191 · doi ↗ · pubmed ↗
- 2Laguerre G.Depret G.Bourion V.Duc G. (2007). Rhizobium leguminosarum bv. viciae genotypes interact with pea plants in developmental responses of nodules, roots and shoots. New Phytol. 176, 680–690. doi: 10.1111/j.1469-8137.2007.02212.x 17822397 · doi ↗ · pubmed ↗
- 3Mutch L. A.Young J. P. W. (2004). Diversity and specificity of Rhizobium leguminosarum biovar viciae on wild and cultivated legumes. Mol. Ecol. 13, 2435–2444. doi: 10.1111/j.1365-294X.2004.02259.x 15245415 · doi ↗ · pubmed ↗
- 4Reeve W.Ardley J.Tian R.Eshragi L.Yoon J. W.Ngamwisetkun P.. (2015). A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey. Standards Genom. Sci. 10, 14. doi: 10.1186/1944-3277-10-14 PMC 432265125685260 · doi ↗ · pubmed ↗
- 5Riah N.Béna G.Djekoun A.Heulin K.de Lajudie P.Laguerre G. (2014). Genotypic and symbiotic diversity of Rhizobium populations associated with cultivated lentil and pea in sub-humid and semi-arid regions of Eastern Algeria. Syst. Appl. Microbiol. 37, 368–375. doi: 10.1016/j.syapm.2013.12.008 24582507 · doi ↗ · pubmed ↗
- 6Sánchez-Cañizares C.Jorrín B.Durán D.Nadendla S.Albareda M.Rubio-Sanz L.. (2018). Genomic diversity in the endosymbiotic bacterium rhizobium leguminosarum. Genes 9, 60. doi: 10.3390/genes 9020060 29364862 PMC 5852556 · doi ↗ · pubmed ↗
- 7Seshadri R.Reeve W. G.Ardley J. K.Tennessen K.Woyke T.Kyrpides N. C.. (2015). Discovery of novel plant interaction determinants from the genomes of 163 root nodule bacteria. Sci. Rep. 5, 16825. doi: 10.1038/srep 16825 26584898 PMC 4653623 · doi ↗ · pubmed ↗
- 8Young J. P.Crossman L. C.Johnston A. W.Thomson N. R.Ghazoui Z. F.Hull K. H.. (2006). The genome of Rhizobium leguminosarum has recognizable core and accessory components. Genome Biol. 7 (4). doi: 10.1186/gb-2006-7-4-r 34 PMC 155799016640791 · doi ↗ · pubmed ↗
