# Multiple Pathways of Visual Adaptations for Water Column Usage in an Antarctic Adaptive Radiation

**Authors:** Ella B. Yoder, Elyse Parker, Bruno Frédérich, Alexandra Tew, Christopher D. Jones, Alex Dornburg

PMC · DOI: 10.1002/ece3.70867 · Ecology and Evolution · 2025-03-09

## TL;DR

This study explores how Antarctic notothenioid fish evolved different visual adaptations for living at various depths in the ocean, revealing unexpected patterns in eye size and light detection.

## Contribution

The study identifies multiple evolutionary pathways for visual adaptations in notothenioids, challenging existing models of visual diversification in aquatic species.

## Key findings

- Eye size diversification accelerated nearly 20 million years after the initial notothenioid radiation.
- Closely related notothenioid species often show the highest eye size divergence.
- Independent opsin tuning site changes occurred repeatedly across the phylogeny, not linked to habitat depth or eye size.

## Abstract

Evolutionary transitions in water column usage have played a major role in shaping ray‐finned fish diversity. However, the extent to which vision‐associated trait complexity and water column usage is coupled remains unclear. Here we investigated the relationship between depth niche, eye size, and the molecular basis of light detection across the Antarctic notothenioid adaptive radiation. Integrating a phylogenetic comparative framework with data on eye size and depth occupancy, we provide support for an acceleration in the rate of eye size diversification nearly 20 million years after the initial radiation. Our results further reveal that levels of eye size divergence are often highest between closely related taxa. We further analyzed opsin tuning site sequences and found changes representing repeated instances of independent tuning site changes across the notothenioid phylogeny that are generally not associated with habitat depth or species eye size. Collectively, our results strongly support that multiple evolutionary pathways underlie the diversification of visual adaptations in this iconic adaptive radiation.

By investigating the diversification of the visual system in notothenioids, we reveal lineages at equivalent depths often depict extremes in eye size with striking convergences in tuning sites between distantly related species that are likely driven by the unusual environmental conditions of the Southern Ocean. This finding represents a striking departure from the expectations of visual diversification in other aquatic lineages and raises new research questions that simultaneously challenge prevailing models of neural diversification while offering a new perspective on visual diversification during adaptive radiation.

## Full-text entities

- **Genes:** Rhodopsin [NCBI Gene 108412055]
- **Chemicals:** lipid (MESH:D008055), vitamin A (MESH:D014801), Rh2 (-), water (MESH:D014867), acid (MESH:D000143)
- **Species:** Phocidae (crawling seals, family) [taxon 9709], Pleuragramma antarctica (Antarctic silverfish, species) [taxon 101504], Trematomus bernacchii (emerald rockcod, species) [taxon 40690], Notothenia angustata (Maori chief, species) [taxon 8210], Pseudochaenichthys georgianus (South Georgia icefish, species) [taxon 52239], Danio rerio (leopard danio, species) [taxon 7955], Gymnodraco acuticeps (species) [taxon 8218], Eleginops maclovinus (Patagonian blennie, species) [taxon 56733], Anarrhichthys ocellatus (wolf-eel, species) [taxon 433405], Dissostichus mawsoni (Antarctic toothfish, species) [taxon 36200], Epinephelus lanceolatus (brindlebass, species) [taxon 310571], Trematomus loennbergii (deepwater notothen, species) [taxon 40692], Cetacea (cetaceans, infraorder) [taxon 9721], Astyanax mexicanus (blind cave fish, species) [taxon 7994], Aethotaxis mitopteryx (species) [taxon 101500], Chionobathyscus dewitti (species) [taxon 70442], Notothenia coriiceps (black rockcod, species) [taxon 8208], Labrus bergylta (ballan wrasse, species) [taxon 56723], Tachysurus fulvidraco (yellow catfish, species) [taxon 1234273], Pygocentrus nattereri (red-bellied piranha, species) [taxon 42514], Lindbergichthys nudifrons (yellowfin notie, species) [taxon 83203], Anguilla anguilla (European eel, species) [taxon 7936], Pogonophryne mentella (species) [taxon 202067], Dissostichus eleginoides (Chilean sea bass, species) [taxon 100907], Thunnus orientalis (northern bluefin tuna, species) [taxon 8238], Actinopterygii (fishes, superclass) [taxon 7898], Champsocephalus gunnari (mackerel icefish, species) [taxon 52237], Spheniscidae (penguins, family) [taxon 9231]
- **Mutations:** D83N, S164P, A292S, D83, M207L, Y265, W265, E122Q, S114A, S118A, A292, W265Y, E122, S164A

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC11890982/full.md

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11890982/full.md

## References

135 references — full list in the complete paper: https://tomesphere.com/paper/PMC11890982/full.md

---
Source: https://tomesphere.com/paper/PMC11890982