# A clinical investigation of constructing a diagnostic model for sepsis-induced coagulopathy utilizing data-independent acquisition proteomics

**Authors:** 奇 陈, 景春 宋, 小雷 万, 俊杰 曾, 晓敏 宋, 林翠 钟, 龙平 何

PMC · DOI: 10.3760/cma.j.cn121090-20241219-00579 · Chinese Journal of Hematology · 2025-01-01

## TL;DR

This study uses proteomics to identify biomarkers and build a diagnostic model for sepsis-induced coagulopathy.

## Contribution

A novel diagnostic model for SIC is developed using DIA proteomics and machine learning techniques.

## Key findings

- 240 differentially expressed proteins were identified in SIC patients.
- A diagnostic model using angiogenin and lectin family member 10 achieved an AUC of 0.896.
- Key pathways include natural killer cell-mediated cytotoxicity and TNF signaling.

## Abstract

采用数据非依赖型采集（DIA）蛋白质组学技术分析脓毒症性凝血病（SIC）的血浆蛋白表达，筛选典型生物标志物并构建诊断模型。

前瞻性观察研究纳入重症医学科46例成年脓毒症患者，收集临床资料并按照SIC标准分为普通脓毒症组（26例）和SIC组（20例），采集血浆标本进行蛋白组学检测并进行生信物信息学分析，应用LASSO、随机森林筛选差异表达蛋白（DEP），根据筛选结果构建SIC诊断模型，并进行受试者工作特征（ROC）曲线分析。

基线资料显示，SIC患者的凝血酶原时间较脓毒症组明显延长，血小板计数明显降低，D-二聚体、纤维蛋白降解产物、血乳酸、SOFA评分和APACHE Ⅱ评分较脓毒症组患者明显升高（P<0.05）。DIA蛋白组学共鉴定出2 637个蛋白，以表达倍数>1.5倍且P<0.05为筛选标准，共筛选出240个DEP，包括81个上调DEP和159个下调DEP。亚细胞定位分析表明，DEP主要在细胞外和细胞核；GO注释显示，DEP在生物过程方面主要参与细胞生理、生物调节和应激反应过程；分子功能方面主要参与生物分子互作和催化作用；结构域注释显示DEP以免疫球蛋白V区为主，是特异识别和结合抗原的部分；KEGG富集分析显示，DEP主要富集在自然杀伤细胞介导的细胞毒性反应、糖基磷脂酰肌醇锚定蛋白合成通路、肿瘤坏死因子信号通路和NF-κB信号通路。对DEP进行LASSO回归和随机森林，筛选出血管生成素、凝集素家族成员10两个变量，且以此构建的SIC诊断模型的ROC曲线下面积为0.896，特异度为0.731，灵敏度为0.900。

由血管生成素、凝集素家族成员10构建的诊断模型可准确诊断SIC。

## Linked entities

- **Proteins:** LOC102930967 (angiogenin-2)

## Full-text entities

- **Genes:** NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, CLEC10A (C-type lectin domain containing 10A) [NCBI Gene 10462] {aka CD301, CLECSF13, CLECSF14, DC-ASGPR, HML, HML2}, ANG (angiogenin) [NCBI Gene 283] {aka ALS9, HEL168, RAA1, RNASE4, RNASE5}
- **Diseases:** SIC (MESH:D001778), cytotoxicity (MESH:D064420), sepsis (MESH:D018805)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11886439/full.md

## References

20 references — full list in the complete paper: https://tomesphere.com/paper/PMC11886439/full.md

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Source: https://tomesphere.com/paper/PMC11886439