# Alteration of primary cilia and intraflagellar transport 20 (IFT20) expression in oral squamous cell carcinoma (OSCC) cell lines

**Authors:** Gulam Sakinah-Syed, Jia Shi Liew, Nazia Abdul Majid, Siti Amalina Inche Zainal Abidin

PMC · DOI: 10.7717/peerj.18931 · 2025-02-24

## TL;DR

This study investigates how changes in primary cilia and IFT20 affect oral cancer cells, finding that cilia are more abundant and longer in cancer cells but IFT20 does not influence MMP-9 expression.

## Contribution

The study reveals increased primary cilia and IFT20 expression in oral cancer cells without affecting MMP-9 mRNA.

## Key findings

- HSC-2 cells show abundant primary cilia in low serum conditions.
- OSCC cells have longer cilia than normal cells, indicating ciliary abnormalities.
- IFT20 expression is elevated in OSCC cells, but IFT20 knockdown does not affect MMP-9 mRNA.

## Abstract

Aberrations in primary cilia expression and intraflagellar transport (IFT) protein function have been implicated in tumourigenesis. This study explores the relationship between the alteration of primary cilia and tumourigenesis by investigating primary cilia expression and the role of IFT20 in regulating matrix metalloproteinase 9 (MMP-9) expression in oral squamous cell carcinoma (OSCC) cell lines.

The frequency and length of primary cilia were determined in OKF6-TERT2 cells, HSC-2 cells, and HSC-3 cells using immunofluorescence. Additionally, primary cilia presence in non-proliferating OSCC cells was examined. OSCC cells were treated with either small interfering RNA (siRNA) negative control or siRNA targeting IFT20 for functional analysis. mRNA expression levels of IFT20 and MMP-9 were quantified using quantitative reverse transcription polymerase chain reaction (qRT-PCR).

Results showed that HSC-2 cells exhibit abundant primary cilia when cultured in low serum media (2% serum) for 48 h, followed by serum starvation for over 72 h. No significant changes in cilia expression were observed in HSC-3 cells compared to OKF6-TERT2 cells. Ciliated cells were found in non-proliferating HSC-2 and HSC-3 cells. OSCC cells showed longer cilia than OKF6-TERT2 cells, indicating ciliary abnormalities. Changes in ciliation and cilium length of OSCC cells were accompanied by increased expression of IFT20, an intraflagellar transport protein crucial for the primary cilia assembly. However, IFT20 knockdown did not affect MMP-9 at the mRNA level in these cells.

This study reveals the differences in primary cilia expression among OSCC cells. Furthermore, the increased abundance and elongation of primary cilia in OSCC cells are accompanied by elevated expression of IFT20. Nonetheless, IFT20 did not affect MMP-9 mRNA expression in OSCC cells.

## Linked entities

- **Genes:** IFT20 (intraflagellar transport 20) [NCBI Gene 90410], MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318]
- **Proteins:** IFT20 (intraflagellar transport 20), MMP9 (matrix metallopeptidase 9)
- **Diseases:** oral squamous cell carcinoma (MONDO:0004958)

## Full-text entities

- **Genes:** MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}, IFT20 (intraflagellar transport 20) [NCBI Gene 90410]
- **Diseases:** ciliary abnormalities (MESH:D002925), OSCC (MESH:D000077195)
- **Cell lines:** OKF6-TERT2 — Homo sapiens (Human), Telomerase immortalized cell line (CVCL_L225), HSC-3 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_1288), HSC-2 — Homo sapiens (Human), Oral cavity squamous cell carcinoma, Cancer cell line (CVCL_1287)

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11867036/full.md

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Source: https://tomesphere.com/paper/PMC11867036