# Evaluation of Risk Factors and a Gene Panel as a Tool for Unexplained Infertility Diagnosis by Next-Generation Sequencing

**Authors:** Eglė Jašinskienė, Ieva Sniečkutė, Ignas Galminas, Lukas Žemaitis, Mantas Simutis, Marija Čaplinskienė

PMC · DOI: 10.3390/medicina61020271 · 2025-02-05

## TL;DR

This study explores how genetic factors and risk analysis can help diagnose unexplained infertility using next-generation sequencing.

## Contribution

The study introduces a gene panel for unexplained infertility and evaluates its diagnostic potential using NGS.

## Key findings

- No significant associations were found between risk factors and unexplained infertility.
- Missense variants in genes like UGT2B7, CATSPER2, CAPN10, and others were identified in some patients.
- The study suggests broader genomic and multi-faceted approaches are needed for better diagnosis.

## Abstract

Background and Objective: Unexplained infertility is a major challenge in reproductive medicine and requires advanced diagnostic approaches to identify the underlying factors accurately. This study aims to evaluate the utility of risk factor analysis and a gene panel in diagnosing unexplained infertility using the next-generation sequencing (NGS) technology. Our study aimed to characterize and identify risk and genetic factors associated with unexplained infertility. Materials and methods: A cohort of patients with unexplained infertility was comprehensively screened for risk factors and genetic variations using a targeted gene panel (10 couples with unexplained infertility (UI) and 36 fertile couples). 108 articles were selected (58 on female infertility and 50 on male infertility) presenting genes that may be associated with unexplained infertility. A gene panel for unexplained infertility was compiled based on the literature data. A customized virtual panel was created from the exome sequencing data. Results: In the female group, controls had a higher mean age, while in the male patients, both groups were similar in terms of age. Both gender groups had comparable BMI values. No significant associations (p > 0.05) between risk factors and unexplained infertility were found when evaluating anthropometric parameters and other sociodemographic characteristics. In two male patients (20%), a molecular defect was detected in NGS variants classified aspossible benign and probably benign In particular, missense variants were identified in the UGT2B7 and CATSPER2 genes, A molecular defect classified as probably damaging was found in five female patients (50%). In particular, missense variants were identified in the CAPN10, MLH3, HABP2, IRS1, GDF9, and SLC19A1 genes. Conclusions: The study emphasizes that unexplained infertility is often related to mechanisms beyond causative mutations and highlights the need for integrative genomic research involving broader gene panels and multi-faceted approaches, including transcriptomics and epigenetics, to uncover latent genetic predispositions.

## Linked entities

- **Genes:** UGT2B7 (UDP glucuronosyltransferase family 2 member B7) [NCBI Gene 7364], CATSPER2 (cation channel sperm associated 2) [NCBI Gene 117155], CAPN10 (calpain 10) [NCBI Gene 11132], MLH3 (mutL homolog 3) [NCBI Gene 27030], HABP2 (hyaluronan binding protein 2) [NCBI Gene 3026], IRS1 (insulin receptor substrate 1) [NCBI Gene 3667], GDF9 (growth differentiation factor 9) [NCBI Gene 2661], SLC19A1 (solute carrier family 19 member 1) [NCBI Gene 6573]

## Full-text entities

- **Genes:** CATSPER2 (cation channel sperm associated 2) [NCBI Gene 117155], UGT2B7 (UDP glucuronosyltransferase family 2 member B7) [NCBI Gene 7364] {aka UDPGT 2B7, UDPGT 2B9, UDPGT2B7, UDPGTH2, UDPGTh-2, UGT2B9}, HABP2 (hyaluronan binding protein 2) [NCBI Gene 3026] {aka FSAP, HABP, HGFAL, NMTC5, PHBP, PHBSP}, GDF9 (growth differentiation factor 9) [NCBI Gene 2661] {aka POF14}, SLC19A1 (solute carrier family 19 member 1) [NCBI Gene 6573] {aka CHMD, FOLT, IFC-1, IFC1, IMD114, MEGAF}, MLH3 (mutL homolog 3) [NCBI Gene 27030] {aka HNPCC7}, IRS1 (insulin receptor substrate 1) [NCBI Gene 3667] {aka HIRS-1}, CAPN10 (calpain 10) [NCBI Gene 11132] {aka CANP10, NIDDM1}
- **Diseases:** Unexplained Infertility (MESH:D007246), male infertility (MESH:D007248), female infertility (MESH:D007247)
- **Species:** Homo sapiens (human, species) [taxon 9606]

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Source: https://tomesphere.com/paper/PMC11857236