# Chemical Evolution of Life on Earth

**Authors:** Lei Lei, Zachary Frome Burton

PMC · DOI: 10.3390/genes16020220 · 2025-02-13

## TL;DR

This paper explores how tRNA sequences reveal the chemical evolution of early life on Earth, showing how primitive molecules led to the first living organisms.

## Contribution

The paper presents a detailed analysis of pre-life tRNA sequences and their role in the origin of life.

## Key findings

- Pre-life tRNA sequences evolved from ligation of three 31 nt minihelices followed by internal deletions.
- The D loop core was a truncated UAGCC repeat, and anticodon and T stem-loops were selected to resist ribozyme nucleases.
- ACCA-Gly was a primitive adapter molecule used to synthesize polyglycine in pre-life conditions.

## Abstract

Background/Objectives: The origin of genes and genetics is the story of the coevolution of translation systems and the genetic code. Remarkably, the history of the origin of life on Earth was inscribed and preserved in the sequences of tRNAs. Methods: Sequence logos demonstrate the patterning of pre-life tRNA sequences. Results: The pre-life type I and type II tRNA sequences are known to the last nucleotide with only a few ambiguities. Type I and type II tRNAs evolved from ligation of three 31 nt minihelices of highly patterned and known sequence followed by closely related 9 nt internal deletion(s) within ligated acceptor stems. The D loop 17 nt core was a truncated UAGCC repeat. The anticodon and T 17 nt stem-loop-stems are homologous sequences with 5 nt stems and 7 nt U-turn loops that were selected in pre-life to resist ribozyme nucleases and to present a 3 nt anticodon with a single wobble position. The 7 nt T loop in tRNA was selected to interact with the D loop at the “elbow”. The 5′-acceptor stem was based on a 7 nt truncated GCG repeat. The 3′-acceptor stem was based on a complementary 7 nt CGC repeat. In pre-life, ACCA-Gly was a primitive adapter molecule ligated to many RNAs, including tRNAs, to synthesize polyglycine. Conclusions: Analysis of sequence logos of tRNAs from an ancient Archaeon substantiates how the pre-life to life transition occurred on Earth. Polyglycine is posited to have aggregated complex molecular assemblies, including minihelices, tRNAs, cooperating molecules, and protocells, leading to the first life on Earth.

## Linked entities

- **Species:** archaeon (taxon 1906665)

## Full-text entities

- **Genes:** TRNG (tRNA-Gly) [NCBI Gene 4563] {aka MTTG}
- **Chemicals:** Polyglycine (MESH:C011080), ACCA-Gly (-), T (MESH:D014316)

## Figures

16 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11854950/full.md

---
Source: https://tomesphere.com/paper/PMC11854950