# H-NS controls the susceptibility of Escherichia coli to aminoglycosides by interfering its uptake and efflux

**Authors:** Qiuru Chen, Yulei Liang, Yanbin Dong, Junling Cui, Kun He, Xiaoyuan Ma, Jinfeng Zhao, Yajun Zhai, Li Yuan

PMC · DOI: 10.3389/fvets.2025.1534498 · Frontiers in Veterinary Science · 2025-02-06

## TL;DR

This study shows that the H-NS protein in E. coli affects how the bacteria respond to aminoglycoside antibiotics by controlling their entry and removal.

## Contribution

The study reveals a novel role of H-NS in modulating aminoglycoside susceptibility through intrinsic gene regulation.

## Key findings

- Deleting H-NS in E. coli significantly reduced the minimum inhibitory concentration of aminoglycosides.
- H-NS deletion increased aminoglycoside uptake by enhancing porin gene expression and reducing efflux pump activity.
- H-NS deletion also increased proton motive force, promoting more aminoglycoside uptake.

## Abstract

H-NS is a histone-like nucleoid-structuring protein that regulates gene expressions, particularly acquired foreign genes, however, little is known about whether H-NS can modulate bacterial susceptibility by regulating its intrinsic genes. The hns-deleted mutant EΔhns, the hns-complemented strain EΔhns/phns and the hns-overexpressed strain E/phns were derivatives of Escherichia coli ATCC 25922, the susceptibility of which were assessed by the broth microdilution method and time-kill curves assays. We found that the MICs for strain EΔhns against gentamicin and amikacin were significantly decreased by 8–16 folds in contrast to E. coli ATCC 25922. Further studies displayed that the absence of hns caused damage to the bacterial outer membrane and increased the expression levels of porin-related genes, such as ompC, ompF, ompG, and ompN, thus obviously enhancing aminoglycosides uptake of strain EΔhns. Meanwhile, hns deletion also led to remarkable inhibition of the efflux pumps activity and decreased expressions of efflux-related genes clbM, acrA, acrB, acrD, and emrE, which reduced the efflux of aminoglycosides. In addition, the activation of glycolysis and electron transport chain, as well as the reduction of Δψ dissipation, could lead to a remarkable increase in proton motive force (PMF), thus further inducing more aminoglycosides uptake by strain EΔhns. Our findings reveal that H-NS regulates the resistance of E. coli to aminoglycosides by influencing its uptake and efflux, which will enrich our understanding of the mechanism by which H-NS modulates bacterial resistance.

## Linked entities

- **Genes:** hns (histone-like protein Hns) [NCBI Gene 886187], ompC (outer membrane porin OmpC) [NCBI Gene 916811], ompF (outer membrane porin OmpF) [NCBI Gene 917757], ompG (outer membrane porin G) [NCBI Gene 912504], ompN (outer membrane porin N) [NCBI Gene 946313], clbM (precolibactin export MATE transporter ClbM) [NCBI Gene 45135062], acrA (multidrug efflux system) [NCBI Gene 914620], acrB (multidrug efflux system protein) [NCBI Gene 915267], acrD (multidrug efflux pump RND permease AcrD) [NCBI Gene 945464], SMDT1 (single-pass membrane protein with aspartate rich tail 1) [NCBI Gene 91689]
- **Proteins:** hns (histone-like protein Hns)
- **Chemicals:** gentamicin (PubChem CID 3467), amikacin (PubChem CID 37768)
- **Species:** Escherichia coli (taxon 562), Escherichia coli ATCC 25922 (taxon 1322345)

## Full-text entities

- **Genes:** H-NS [NCBI Gene 13905950], histone-like nucleoid-structuring protein [NCBI Gene 16691431]
- **Chemicals:** gentamicin (MESH:D005839), amikacin (MESH:D000583), aminoglycosides (MESH:D000617)
- **Species:** Escherichia coli ATCC 25922 (strain) [taxon 1322345], Escherichia coli (E. coli, species) [taxon 562]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11840965/full.md

## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC11840965/full.md

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Source: https://tomesphere.com/paper/PMC11840965