Draft whole-genome sequence of Enterococcus faecium isolate from a clinical sample from Dhaka, Bangladesh
Syeda Tasneem Towhid, Md Maksudur Rahman Shihab, Mohammad Jubair, Naimul Islam Faisal, Md. Mustafizur Rahman
TL;DR
This paper presents the whole-genome sequence of an Enterococcus faecium isolate from a clinical sample in Bangladesh.
Contribution
The study provides a new genome sequence of a clinically relevant Enterococcus faecium isolate.
Findings
The genome is 3,111,621 nucleotides long with a GC% of 37.6%.
The isolate was identified as a human pathogen with 92.3% probability.
The genome sequence is publicly available on NCBI.
Abstract
We collected a urine specimen from a 20-year-old male, cultured it on Chrom-agar Enterococcus, identified it with VITEK2, and whole-genome sequenced it using the PacBio RSII. The genome was 3,111,621 nucleotides long with a GC% of 37.6%. It was identified as a human pathogen with a 92.3% probability and is available on NCBI with an accession ID of JBFBPS000000000.1.
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Taxonomy
TopicsBacterial Identification and Susceptibility Testing · Antimicrobial Resistance in Staphylococcus · Genomics and Phylogenetic Studies