# Role of NHERF1 in MicroRNA Landscape Changes in Aging Mouse Kidneys

**Authors:** Anish Jain, Hyun Jun Jung, Joseph Aubee, Jahn N. O’Neil, Laila A. Muhammad, Shaza Khan, Karl Thompson, Maurice B. Fluitt, Dexter L. Lee, Carolyn M. Klinge, Syed J. Khundmiri

PMC · DOI: 10.3390/biom14091048 · 2024-08-23

## TL;DR

This study explores how the absence of NHERF1 affects microRNA levels and cytokine expression in aging mouse kidneys.

## Contribution

The paper identifies novel miRNA-NHERF1 interactions that influence cytokine expression during aging.

## Key findings

- NHERF1 knockout mice showed decreased levels of specific miRNAs like miR-153.
- Loss of NHERF1 increased nuclear NFATc2 and NFATc3, leading to higher cytokine expression.
- miR-153 downregulates NFATc2 and NFATc3, which are linked to cytokine production.

## Abstract

MicroRNAs (miRNAs) play important roles in the regulation of cellular function and fate via post-transcriptional regulation of gene expression. Although several miRNAs are associated with physiological processes and kidney diseases, not much is known about changes in miRNAs in aging kidneys. We previously demonstrated that sodium hydrogen exchanger 1 (NHERF1) expression regulates cellular responses to cisplatin, age-dependent salt-sensitive hypertension, and sodium-phosphate cotransporter trafficking. However, the mechanisms driving these regulatory effects of NHERF1 on cellular processes are unknown. Here, we hypothesize that dysregulation of miRNA-mediated gene regulatory networks that induce fibrosis and cytokines may depend on NHERF1 expression. To address this hypothesis, we compared miRNA expression in kidneys from both male and female old (12–18-month-old) and young (4–7-month-old) wild-type (WT) and NHERF1 knockout (NHERF1−/−) mice. Our results identified that miRNAs significantly decreased in NHERF1−/− mice included miR-669m, miR-590-3p, miR-153, miR-673-3p, and miR-127. Only miR-702 significantly decreased in aged WT mice, while miR-678 decreased in both WT and NHERF1−/− old versus young mice. miR-153 was shown to downregulate transcription factors NFATc2 and NFATc3 which regulate the transcription of several cytokines. Immunohistochemistry and western blotting revealed a significant increase in nuclear NFATc2 and NFATc3 in old NHERF1−/− mice compared to old WT mice. Our data further show that expression of the cytokines IL-1β, IL-6, IL-17A, MCP1, and TNF-α significantly increased in the old NHERF1−/− mice compared to the WT mice. We conclude that loss of NHERF1 expression induces cytokine expression in the kidney through interactive regulation between miR-153 and NFATc2/NFATc3 expression.

## Linked entities

- **Genes:** NHERF1 (NHERF family PDZ scaffold protein 1) [NCBI Gene 9368], Mir153 (microRNA 153) [NCBI Gene 387171], MIR127 (microRNA 127) [NCBI Gene 406914], Mir702 (microRNA 702) [NCBI Gene 735283], Mir678 (microRNA 678) [NCBI Gene 751554], NFATC2 (nuclear factor of activated T cells 2) [NCBI Gene 4773], NFATC3 (nuclear factor of activated T cells 3) [NCBI Gene 4775]
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Nfatc2 (nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2) [NCBI Gene 18019] {aka NF-ATc2, NF-ATp, NFAT1, NFAT1-D, Nfatp}, Mir673 (microRNA 673) [NCBI Gene 751547] {aka Mirn673, mir-673, mmu-mir-673}, Mir678 (microRNA 678) [NCBI Gene 751554] {aka Mirn678, mmu-mir-678}, Il6 (interleukin 6) [NCBI Gene 16193] {aka Il-6}, Mir153 (microRNA 153) [NCBI Gene 387171] {aka Mirn153, mir-153, mmu-mir-153}, Il1b (interleukin 1 beta) [NCBI Gene 16176] {aka IL-1beta, Il-1b}, Mcpt1 (mast cell protease 1) [NCBI Gene 17224] {aka Mcp-1}, Mir590 (microRNA 590) [NCBI Gene 100124477] {aka Mirn590, mmu-mir-590}, Tnf (tumor necrosis factor) [NCBI Gene 21926] {aka DIF, TNF-a, TNF-alpha, TNFSF2, TNFalpha, Tnfa}, Il17a (interleukin 17A) [NCBI Gene 16171] {aka Ctla-8, Ctla8, IL-17, IL-17A, Il17}, Slc9a1 (solute carrier family 9 (sodium/hydrogen exchanger), member 1) [NCBI Gene 20544] {aka Apnh, Mir5122, Nhe1, mir-5122, swe}, Nherf1 (NHERF family PDZ scaffold protein 1) [NCBI Gene 26941] {aka EBP-50, NHE-RF, NHERF-1, Slc9a3r1}, Mir127 (microRNA 127) [NCBI Gene 387146] {aka Mirn127, mir-127, mmu-mir-127}, Mir702 (microRNA 702) [NCBI Gene 735283] {aka Mirn702, mir-702, mmu-mir-702}, Nfatc3 (nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3) [NCBI Gene 18021] {aka D8Ertd281e, NFAT4, NFATx}
- **Diseases:** kidney diseases (MESH:D007674), -sensitive hypertension (MESH:D006973), fibrosis (MESH:D005355)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11430241/full.md

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Source: https://tomesphere.com/paper/PMC11430241