# Single-cell transcriptomics reveals neural stem cell trans-differentiation and cell subpopulations in whole heart decellularized extracellular matrix

**Authors:** Xiaoning Yang, Yuwei Zhao, Wei Liu, Zhongbao Gao, Chunlan Wang, Changyong Wang, Siwei Li, Xiao Zhang

PMC · DOI: 10.52601/bpr.2024.240011 · Biophysics Reports · 2024-08-31

## TL;DR

This study uses single-cell RNA sequencing to show how neural stem cells can transform into heart-like cells when placed in a heart extracellular matrix scaffold.

## Contribution

The study identifies specific cell subpopulations and dual lineage signatures during neural stem cell trans-differentiation into cardiac lineage cells.

## Key findings

- Neural stem cells can trans-differentiate into cardiac lineage cells while retaining their neural differentiation potential.
- Trans-differentiated heart-like cells exhibit dual signatures of neuroectoderm and cardiac mesoderm.
- The whole heart decellularized extracellular matrix supports cellular diversity in recellularization.

## Abstract

The whole heart decellularized extracellular matrix (ECM) has become a promising scaffold material for cardiac tissue engineering. Our previous research has shown that the whole heart acellular matrix possesses the memory function regulating neural stem cells (NSCs) trans-differentiating to cardiac lineage cells. However, the cell subpopulations and phenotypes in the trans-differentiation of NSCs have not been clearly identified. Here, we performed single-cell RNA sequencing and identified 2,765 cells in the recellularized heart with NSCs revealing the cellular diversity of cardiac and neural lineage, confirming NSCs were capable of trans-differentiating into the cardiac lineage while maintaining the original ability to differentiate into the neural lineage. Notably, the trans-differentiated heart-like cells have dual signatures of neuroectoderm and cardiac mesoderm. This study unveils an in-depth mechanism underlying the trans-differentiation of NSCs and provides a new opportunity and theoretical basis for cardiac regeneration.

## Full-text entities

- **Genes:** Kifc1 (kinesin family member C1) [NCBI Gene 100502766] {aka 100042970, Gm4137, HSET, KNSL2, Kifc5a, Knsl2a}, epidermal growth factor [NCBI Gene 108348113], MKI67 (marker of proliferation Ki-67) [NCBI Gene 4288] {aka KIA, MIB-, MIB-1, PPP1R105}, Tnni3 (troponin I, cardiac 3) [NCBI Gene 21954] {aka Tn1, cTnI}, Fgf2 (fibroblast growth factor 2) [NCBI Gene 54250] {aka Fgf-2, Fgf2a, bFGF}, Map2 (microtubule-associated protein 2) [NCBI Gene 25595] {aka MAP2R, Mtap2}, Mog (myelin oligodendrocyte glycoprotein) [NCBI Gene 17441] {aka B230317G11Rik}, Mag (myelin-associated glycoprotein) [NCBI Gene 17136] {aka Gma, siglec-4a}, TUBB4B (tubulin beta 4B class IVb) [NCBI Gene 10383] {aka Beta2, LCAEOD, TUBB2, TUBB2C}, Gja1 (gap junction protein, alpha 1) [NCBI Gene 14609] {aka Cnx43, Cx43, Cx43alpha1, Cxnk1, Gja-1, Npm1}, DCN (decorin) [NCBI Gene 1634] {aka CSCD, DSPG2, PG40, PGII, PGS2, SLRR1B}, NKX2-5 (NK2 homeobox 5) [NCBI Gene 1482] {aka CHNG5, CSX, CSX1, HLHS2, NKX2.5, NKX2E}, Myh7 (myosin, heavy polypeptide 7, cardiac muscle, beta) [NCBI Gene 140781] {aka B-MHC, MYH-beta/slow, MyHC-I, Myhc-b, Myhcb, beta-MHC}, VWF (von Willebrand factor) [NCBI Gene 7450] {aka F8VWF, VWD}, Mki67 (antigen identified by monoclonal antibody Ki 67) [NCBI Gene 17345] {aka D630048A14Rik, Ki-67, Ki67}, Mobp (myelin-associated oligodendrocytic basic protein) [NCBI Gene 17433] {aka MOBP155, MOBP170, MOBP69, MOBP73, MOBP81}, Nkx2-5 (NK2 homeobox 5) [NCBI Gene 18091] {aka Csx, Nkx-2.5, Nkx2.5, tinman}, GATA4 (GATA binding protein 4) [NCBI Gene 2626] {aka ASD2, TACHD, TOF, VSD1}, Kif2c (kinesin family member 2C) [NCBI Gene 73804] {aka 4930402F02Rik, ESTM5, Knsl6, MCAK}, Olig2 (oligodendrocyte transcription factor 2) [NCBI Gene 50913] {aka Bhlhb1, Olg-2, Oligo2, RK17, bHLHe19}, TNNI3 (troponin I3, cardiac type) [NCBI Gene 7137] {aka CMD1FF, CMD2A, CMH7, RCM1, TNNC1, cTnI}, Runx2 (runt related transcription factor 2) [NCBI Gene 12393] {aka AML3, CBF-alpha-1, Cbf, Cbfa-1, Cbfa1, LS3}, Slit3 (slit guidance ligand 3) [NCBI Gene 20564] {aka Slil2, Slit1, b2b2362.1Clo}, Gfap (glial fibrillary acidic protein) [NCBI Gene 14580], TBX18 (T-box transcription factor 18) [NCBI Gene 9096] {aka CAKUT2, PUJO}, Gata4 (GATA binding protein 4) [NCBI Gene 14463] {aka Gata-4}, Pax6 (paired box 6) [NCBI Gene 25509], Stmn2 (stathmin-like 2) [NCBI Gene 20257] {aka SCG10, Scgn10, Stmb2}, Tbx18 (T-box18) [NCBI Gene 76365] {aka 2810012F10Rik, 2810404D13Rik}, Gata6 (GATA binding protein 6) [NCBI Gene 14465] {aka GATA-6}, SNCG (synuclein gamma) [NCBI Gene 6623] {aka BCSG1, SR}, KIFC1 (kinesin family member C1) [NCBI Gene 3833] {aka HSET, KNSL2}, Pdgfra (platelet derived growth factor receptor, alpha polypeptide) [NCBI Gene 18595] {aka CD140a, Pdgfr-2}, VEGFD (vascular endothelial growth factor D) [NCBI Gene 2277] {aka FIGF, VEGF-D}, Ccl6 (C-C motif chemokine ligand 6) [NCBI Gene 20305] {aka MRP-1, Scya6, c10}, Olig1 (oligodendrocyte transcription factor 1) [NCBI Gene 50914] {aka Bhlhb6, Olg-1, Oligo1, bHLHe21}, Fgf5 (fibroblast growth factor 5) [NCBI Gene 60662] {aka FGF-5, Fgf3a, HBGF-5}
- **Diseases:** brain injury (MESH:D001930), central nervous system damage (MESH:D002493), death (MESH:D003643), Myocardial infarction (MESH:D009203), cord (MESH:D013118)
- **Chemicals:** ethanol (MESH:D000431), eosin (MESH:D004801), Triton-X100 (MESH:D017830), glycosaminoglycans (MESH:D006025), glutaraldehyde (MESH:D005976), heparin (MESH:D006493), DAPI (MESH:C007293), paraffin (MESH:D010232), AuPd (-), hematoxylin (MESH:D006416), SDS (MESH:D012967), carbon nanotube (MESH:D037742), H&amp;E (MESH:D006371), Trypan blue (MESH:D014343)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), C6 — Rattus norvegicus (Rat), Rat malignant glioma, Cancer cell line (CVCL_0194)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC11399890/full.md

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11399890/full.md

## References

40 references — full list in the complete paper: https://tomesphere.com/paper/PMC11399890/full.md

---
Source: https://tomesphere.com/paper/PMC11399890