# Nanopore sequencing of IPNV vp2 gene in Peruvian Andean trout (Oncorhynchus mykiss) cultures

**Authors:** Stephanie Tapia, Joseph Orellana, Yerson Duran, Jose Rodriguez, Derly Angulo, Luz Dominguez-Mendoza, Sandra Grabiel, Jose Silva, Romina Caballero, Katherine Zapata, Muriel Gómez, Luis Tataje-Lavanda, Rodolfo Velazco

PMC · DOI: 10.1128/mra.00190-24 · Microbiology Resource Announcements · 2024-08-20

## TL;DR

Nanopore sequencing of a virus in trout in Peru identifies two genogroups, helping improve disease monitoring and control in fish farming.

## Contribution

The study identifies genogroups 1 and 5 of IPNV in Peruvian Andean trout using nanopore sequencing.

## Key findings

- Genogroups 1 and 5 of IPNV were detected in Peruvian Andean trout cultures.
- Nanopore sequencing provides insights into IPNV strain diversity and pathogenicity.
- The findings support better disease surveillance and control in aquaculture.

## Abstract

Nanopore sequencing of the infectious pancreatic necrosis virus (IPNV) vp2
gene from Andean trout cultures in Peru reveals genogroups 1 and 5. This
insight aids in understanding strain diversity and pathogenicity, vital for
effective disease surveillance, and control measures in aquaculture.

## Linked entities

- **Genes:** VP2 (vacuolar H+-pyrophosphatase 2) [NCBI Gene 844231]
- **Species:** Oncorhynchus mykiss (taxon 8022)

## Full-text entities

- **Species:** Oncorhynchus mykiss (rainbow trout, species) [taxon 8022], Infectious pancreatic necrosis virus (no rank) [taxon 11002]

## Full text

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## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC11392497/full.md

## References

18 references — full list in the complete paper: https://tomesphere.com/paper/PMC11392497/full.md

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Source: https://tomesphere.com/paper/PMC11392497