# Transcriptome analysis to explore the mechanism of downregulated TNIK influencing the effect of risperidone

**Authors:** Ruixue Yuan, Yaojing Li, Xiangyi Li, Yingmei Fu, Ailing Ning, Dongxiang Wang, Ran Zhang, Shunying Yu, Qingqing Xu

PMC · DOI: 10.3389/fphar.2024.1431923 · 2024-08-23

## TL;DR

This study explores how reduced TNIK levels affect risperidone's action in schizophrenia, revealing links to bone metabolism and potential side effects like osteoporosis.

## Contribution

The study identifies novel molecular pathways and potential targets linking TNIK downregulation to risperidone's effects and side effects in schizophrenia.

## Key findings

- Downregulated TNIK impacts collagen extracellular matrix and PI3K-Akt signaling.
- Risperidone treatment enriches parathyroid hormone and bone mineralization pathways.
- FGFR2, FGF1, and FGFR are potential targets for TNIK's influence on risperidone effects.

## Abstract

Risperidone is one of the most reliable and effective antipsychotics for schizophrenia treatment. However, the mechanism of action of risperidone is not yet fully understood. Traf2 and Nck-interacting protein kinase (TNIK), a schizophrenia susceptibility gene, is associated with risperidone treatment response. Our previous in vitro experiments confirmed that downregulated TNIK affected the effect of risperidone on downstream targets. However, the effect of downregulated TNIK on risperidone-induced molecular expression remains to be further explored.

Transcriptome analysis was performed on U251 cells subjected to risperidone, TNIK siRNA, and no treatment, respectively. Compared to the no-treatment group, two groups of DEGs were screened out and then intersected with the schizophrenia-related genes to screen the cross-talk genes. Those DEGs were analyzed using GO and KEGG. STRING and Cytoscape were used to construct a protein-protein interaction (PPI) network for the cross-talk gene.

The results showed that the parathyroid hormone synthesis, secretion, and action were significantly enriched after risperidone treatment. Downregulated TNIK could have an impact on the collagen-containing extracellular matrix, signaling receptor activator activity, and PI3K-Akt signaling pathway. Interestingly, bone mineralization function and calcium signaling pathway were enriched in the cross-talk genes. Additionally, FGFR2, FGF1, and FGFR might be the potential targets for TNIK affecting the effects of risperidone.

The study indicated that risperidone primarily influences functions and/or pathways associated with bone metabolism, potentially contributing to the adverse effect of osteoporosis. Our study may offer a novel perspective on investigating the mechanisms underlying the adverse effects of risperidone.

## Linked entities

- **Genes:** TNIK (TRAF2 and NCK interacting kinase) [NCBI Gene 23043], FGFR2 (fibroblast growth factor receptor 2) [NCBI Gene 2263], FGF1 (fibroblast growth factor 1) [NCBI Gene 2246], FGFR (fibroblast growth factor receptor) [NCBI Gene 373310]
- **Chemicals:** risperidone (PubChem CID 5073)
- **Diseases:** schizophrenia (MONDO:0005090), osteoporosis (MONDO:0005298)

## Full-text entities

- **Genes:** PTH (parathyroid hormone) [NCBI Gene 5741] {aka FIH1, PTH1}, FGFR2 (fibroblast growth factor receptor 2) [NCBI Gene 2263] {aka BBDS, BEK, BFR-1, CD332, CEK3, CFD1}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, TNIK (TRAF2 and NCK interacting kinase) [NCBI Gene 23043] {aka MAP4K7, MRT54}, TRAF2 (TNF receptor associated factor 2) [NCBI Gene 7186] {aka MGC:45012, RNF117, TRAP, TRAP3}, FGF1 (fibroblast growth factor 1) [NCBI Gene 2246] {aka AFGF, ECGF, ECGF-beta, ECGFA, ECGFB, FGF-1}
- **Diseases:** schizophrenia (MESH:D012559), osteoporosis (MESH:D010024)
- **Chemicals:** calcium (MESH:D002118), Risperidone (MESH:D018967)
- **Cell lines:** U251 — Homo sapiens (Human), Astrocytoma, Cancer cell line (CVCL_0021)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11391209/full.md

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Source: https://tomesphere.com/paper/PMC11391209