# Mobile-CRISPRi protocol optimization for Vibrionaceae

**Authors:** Logan J. Geyman, Madeline P. Tanner, Natalia Rosario-Meléndez, Jason M. Peters, Mark J. Mandel, Julia C. van Kessel

PMC · DOI: 10.1128/mra.00040-24 · Microbiology Resource Announcements · 2024-07-05

## TL;DR

This paper describes optimized methods for using the Mobile-CRISPRi system to knock down gene expression in various Vibrio bacteria.

## Contribution

The study provides optimized protocols for applying Mobile-CRISPRi in multiple Vibrio species.

## Key findings

- Mobile-CRISPRi components were successfully integrated into the chromosome of Vibrio species via Tn7 transposition.
- The optimized protocol enables inducible gene expression knockdown in multiple Vibrio species.
- The system uses isopropyl β-D-1-thiogalactopyranoside to induce deactivating Cas9 and guide RNA expression.

## Abstract

Mobile clustered regularly interspaced palindromic repeats interference (Mobile-CRISPRi) is an established method for bacterial gene expression knockdown. The deactivated Cas9 protein and guide RNA are isopropyl β-D-1-thiogalactopyranoside inducible, and all components are integrated into the chromosome via Tn7 transposition. Here, we optimized methods specific for applying Mobile-CRISPRi in multiple Vibrio species.

## Linked entities

- **Proteins:** cas9 (type II CRISPR RNA-guided endonuclease Cas9)
- **Species:** Vibrio (taxon 662)

## Full-text entities

- **Diseases:** Vibrio (MESH:D014735)
- **Chemicals:** isopropyl beta-D-1-thiogalactopyranoside (-)

## Full text

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## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC11320974/full.md

## References

6 references — full list in the complete paper: https://tomesphere.com/paper/PMC11320974/full.md

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Source: https://tomesphere.com/paper/PMC11320974