# The impact of retrotransposons on castor bean genomes

**Authors:** Lin Kong, Tingting Zhang, Lei Ma

PMC · DOI: 10.3389/fpls.2024.1397215 · Frontiers in Plant Science · 2024-07-23

## TL;DR

This study examines how transposable elements influence the evolution of castor bean genomes from different regions.

## Contribution

The study reveals distinct evolutionary dynamics of transposable elements compared to genes in castor bean genomes.

## Key findings

- Transposable elements account for about 36.7% of the genomic sequences in castor bean lineages.
- Transposable elements show lower correlation with genes and an inverse chromosomal distribution trend.
- Hale may have originated from the ancestor of Rc039, indicating evolutionary divergence.

## Abstract

Castor bean (Ricinus communis L.) is an important oil crop. However, the influence of transposable elements (TEs) on the dynamics of castor bean evolution awaits further investigation. This study explored the role of transposable elements in the genomes of wild castor bean accessions from Ethiopia (Rc039) and Kenya (WT05) as well as in the cultivated variety (Hale). The distribution and composition of repeat sequences in these three lineages exhibited relative consistency, collectively accounting for an average of 36.7% of the genomic sequences. Most TE families displayed consistent lengths and compositions across these lineages. The dynamics of TEs significantly differed from those of genes, showing a lower correlation between the two. Additionally, the distribution of TEs on chromosomes showed an inverse trend compared to genes. Furthermore, Hale may have originated from the ancestor of Rc039. The divergent evolutionary paths of TEs compared to genes indicate the crucial role of TEs in shaping castor bean genetics and evolution, providing insights into the fields of castor bean and plant genomics research.

## Full-text entities

- **Diseases:** castor bean (MESH:C536240)
- **Chemicals:** oil (MESH:D009821)
- **Species:** Ricinus communis (castor bean, species) [taxon 3988]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11300327/full.md

## References

66 references — full list in the complete paper: https://tomesphere.com/paper/PMC11300327/full.md

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Source: https://tomesphere.com/paper/PMC11300327