# Novel Coumarin–Nucleobase Hybrids with Potential Anticancer Activity: Synthesis, In Vitro Cell-Based Evaluation, and Molecular Docking

**Authors:** Maiara Correa de Moraes, Rafaele Frassini, Mariana Roesch-Ely, Favero Reisdorfer de Paula, Thiago Barcellos

PMC · DOI: 10.3390/ph17070956 · 2024-07-17

## TL;DR

Scientists created new compounds by combining coumarins and nucleobases, which showed promising anticancer activity in lab tests and computer modeling.

## Contribution

The study introduces novel coumarin–nucleobase hybrids with anticancer potential, validated through synthesis, cell-based assays, and molecular docking.

## Key findings

- Compound 9a showed strong anticancer activity with an IC50 of 24.19 ± 1.39 μM against colon carcinoma cells.
- Molecular docking revealed high affinity of the compounds to the Topoisomerase 1–DNA complex.
- In silico studies indicated low mutagenic and tumorigenic risk for the compounds.

## Abstract

A new series of compounds planned by molecular hybridization of the nucleobases uracil and thymine, or the xanthine theobromine, with coumarins, and linked through 1,2,3-triazole heterocycles were evaluated for their in vitro anticancer activity against the human tumor cell lines: colon carcinoma (HCT116), laryngeal tumor cells (Hep-2), and lung carcinoma cells (A549). The hybrid compound 9a exhibited better activity in the series, showing an IC50 of 24.19 ± 1.39 μM against the HCT116 cells, with a selectivity index (SI) of 6, when compared to the cytotoxicity against the non-tumor cell line HaCat. The in silico search for pharmacological targets was achieved through molecular docking studies on all active compounds, which suggested that the synthesized compounds possess a high affinity to the Topoisomerase 1–DNA complex, supporting their antitumor activity. The in silico toxicity prediction studies suggest that the compounds present a low risk of causing theoretical mutagenic and tumorigenic effects. These findings indicate that molecular hybridization from natural derivative molecules is an interesting approach to seek new antitumor candidates.

## Linked entities

- **Proteins:** TOP1ALPHA (DNA topoisomerase I alpha)
- **Chemicals:** coumarins (PubChem CID 54678486), uracil (PubChem CID 1174), thymine (PubChem CID 1135), 1,2,3-triazole (PubChem CID 67516)
- **Diseases:** colon carcinoma (MONDO:0002032), laryngeal tumor (MONDO:0002354), lung carcinoma (MONDO:0005138)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Diseases:** colon carcinoma (MESH:D003110), laryngeal tumor (MESH:D007822), tumor (MESH:D009369), cytotoxicity (MESH:D064420), tumorigenic (MESH:D002471), lung carcinoma (MESH:D008175)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** Hep-2 — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_1906), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), HCT116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), HaCat — Homo sapiens (Human), Spontaneously immortalized cell line (CVCL_0038)

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11279566/full.md

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Source: https://tomesphere.com/paper/PMC11279566