# Genome-Wide Characterization of Fructose 1,6-Bisphosphate Aldolase Genes and Expression Profile Reveals Their Regulatory Role in Abiotic Stress in Cucumber

**Authors:** Jinlong Zhang, Yike Liu, Zhenpeng Zhou, Lina Yang, Zhanjun Xue, Qingyun Li, Bingbing Cai

PMC · DOI: 10.3390/ijms25147687 · International Journal of Molecular Sciences · 2024-07-13

## TL;DR

This study identifies and characterizes five FBA genes in cucumber, showing their role in plant responses to environmental stresses like cold, heat, and salt.

## Contribution

The study provides the first systematic characterization of the FBA gene family in cucumber and its role in abiotic stress responses.

## Key findings

- Five CsFBA genes were identified and classified into two phylogenetic clades.
- CsFBA genes showed conserved domains and distinct physicochemical properties.
- Expression analysis revealed their responsiveness to abiotic stresses such as cold, heat, and salt.

## Abstract

The fructose-1,6-bisphosphate aldolase (FBA) gene family exists in higher plants, with the genes of this family playing significant roles in plant growth and development, as well as response to abiotic stresses. However, systematic reports on the FBA gene family and its functions in cucumber are lacking. In this study, we identified five cucumber FBA genes, named CsFBA1-5, that are distributed randomly across chromosomes. Phylogenetic analyses involving these cucumber FBAs, alongside eight Arabidopsis FBA proteins and eight tomato FBA proteins, were conducted to assess their homology. The CsFBAs were grouped into two clades. We also analyzed the physicochemical properties, motif composition, and gene structure of the cucumber FBAs. This analysis highlighted differences in the physicochemical properties and revealed highly conserved domains within the CsFBA family. Additionally, to explore the evolutionary relationships of the CsFBA family further, we constructed comparative syntenic maps with Arabidopsis and tomato, which showed high homology but only one segmental duplication event within the cucumber genome. Expression profiles indicated that the CsFBA gene family is responsive to various abiotic stresses, including low temperature, heat, and salt. Taken together, the results of this study provide a theoretical foundation for understanding the evolution of and future research into the functional characterization of cucumber FBA genes during plant growth and development.

## Linked entities

- **Proteins:** FBXO3 (F-box protein 3)
- **Species:** Arabidopsis (taxon 3701)

## Full-text entities

- **Species:** Solanum lycopersicum (tomato, species) [taxon 4081], Cucumis sativus (cucumber, species) [taxon 3659], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702]

## Full text

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## Figures

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## References

56 references — full list in the complete paper: https://tomesphere.com/paper/PMC11276831/full.md

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Source: https://tomesphere.com/paper/PMC11276831