# Neural Network-Based Filter Design for Compressive Raman Classification of Cells

**Authors:** Stefan Semrau

PMC · DOI: 10.1021/acs.jcim.3c01856 · Journal of Chemical Information and Modeling · 2024-07-03

## TL;DR

This paper introduces a neural network method to speed up Raman spectroscopy for cell classification, making it practical for high-throughput cell-based therapies.

## Contribution

A novel neural network approach for optimizing compressive Raman sensing parameters to enable fast, accurate cell classification.

## Key findings

- The method achieves 90% classification accuracy using only five Raman intensity combinations.
- It reduces Raman measurement time by two orders of magnitude.
- The approach is demonstrated on three different cell types.

## Abstract

Cell-based therapies are bound to revolutionize medicine,
but significant
technical hurdles must be overcome before wider adoption. In particular,
nondestructive, label-free methods to characterize cells in real time
are needed to optimize the production process and improve quality
control. Raman spectroscopy, which provides a fingerprint of a cell’s
chemical composition, would be an ideal modality but is too slow for
high-throughput applications. Compressive Raman techniques, which
measure only linear combinations of Raman intensities, can be fast
but require careful optimization to deliver high performance. Here,
we develop a neural network model to identify optimal parameters for
a compressive sensing scheme that reduces measurement time by 2 orders
of magnitude. In a data set containing Raman spectra of three different
cell types, it achieves up to 90% classification accuracy using only
five linear combinations of Raman intensities. Our method thus unlocks
the power of Raman spectroscopy for the characterization of cell products.

## Full-text entities

- **Genes:** CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}
- **Diseases:** arthritis (MESH:D001168), cancer (MESH:D009369)
- **Chemicals:** lipids (MESH:D008055), carbohydrates (MESH:D002241)
- **Mutations:** S10A, S11A
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11267571/full.md

## References

48 references — full list in the complete paper: https://tomesphere.com/paper/PMC11267571/full.md

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Source: https://tomesphere.com/paper/PMC11267571