Complete genome sequence of multidrug-resistant Raoultella terrigena strain RT01-5M1 isolated from farmed salmon in Canada
Bei Zhang, Tianbi Tan, Derek D. N. Smith, Marc-Olivier Duceppe, Bashudev Rudra, Radhey S. Gupta, Dele Ogunremi
TL;DR
This paper reports the full genome sequence of a multidrug-resistant Raoultella terrigena strain found in farmed salmon in Canada.
Contribution
The study provides the complete genome sequence of a multidrug-resistant Raoultella terrigena strain isolated from farmed salmon.
Findings
The genome was assembled with a chromosome of 5,699,993 bp and two plasmids.
Antimicrobial resistance genes were identified in the chromosome and smaller plasmid.
Abstract
The genome sequence of multidrug-resistant Raoultella terrigena RT01-5M1 strain isolated from Canadian farmed salmon was determined using Oxford nanopore and Illumina MiSeq sequencers. The assembled chromosome was estimated at 5,699,993 bp in size, with two plasmids, 164,879 bp and 82,046 bp. The chromosome and smaller plasmid contained antimicrobial resistance genes.
Genes, proteins, chemicals, diseases, species, mutations and cell lines named across the full text — each resolved to its canonical identifier and authoritative record.
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Taxonomy
TopicsGenomics and Phylogenetic Studies · Aquaculture disease management and microbiota · Microbial infections and disease research