# Unpredictable Dynamic Behaviour of Ruthenium Chelate Pyrrole Derivatives

**Authors:** Giacomo Drius, Riccardo Tarroni, Matteo Birchmeier, Carola Parolin, Carla Boga, Magda Monari, Silvia Bordoni

PMC · DOI: 10.3390/molecules29133068 · Molecules · 2024-06-27

## TL;DR

This paper explores the dynamic behavior of ruthenium chelate pyrrole derivatives and their structural transformations under different conditions.

## Contribution

The study reveals an unusual dynamic chelate conversion and isolates new functional isomers with distinct structural and electronic properties.

## Key findings

- Prolonged acetonitrile refluxing causes a dynamic chelate conversion from k2(O,O)- to k2(N,O)- species.
- Two functional isomers (4 and 5) were isolated with distinct structural features and aromatic characteristics.
- The derivatives showed antibacterial and antifungal activity against tested microorganisms.

## Abstract

Reaction of [Ru(H)2(CO)(PPh3)3] 1 with an equimolar amount of pyrrole-2-carboxylic acid (H2L1) leads to the homoleptic chelate derivative k2(O,O)-[RuH(CO)(HL1)(PPh3)2] 2. Prolonged acetonitrile refluxing promotes an unusual k2(O,O)- → k2(N,O)- dynamic chelate conversion, forming a neutral, stable, air- and moisture- insensitive, solvento-species k2(N,O)-[Ru(MeCN)(CO)(L1)(PPh3)2] 3. Analogously, reaction of 1 with the pyrrole-2-carboxyaldehyde (HL2) affords k2(N,O)-[RuH(CO)(HL2)(PPh3)2] 4, 5, as a couple of functional isomers. Optimized reaction conditions such as temperature and solvent polarity allow the isolation of dominant configurations. Structure 5 is a pyrrolide Ru-carbaldehyde, obtained from cyclization of the pendant CHO function, whereas species 4 can be viewed as an ethanoyl-conjugated Ru-pyrrole. Derivatives 3–5 were characterized by single crystal X-ray diffraction, ESI-Ms, IR, and NMR spectroscopy, indicating distinct features for the Ru-bonded pyrrolyl groups. DFT computational results, coplanarity, bond equalization, and electron delocalization along the fused five-membered rings support aromatic features. In accordance with the antisymbiotic trans-influence, both the isolated isomers 4 and 5 disclose CO ligands opposite to N- or O-anionic groups. The quantitative Mayer bond order evidences a stabilizing backbonding effect. Antibacterial and antifungal trials on Gram-positive (Staphylococcus aureus), Gram-negative (Escherichia coli), and Candida albicans were further carried out.

## Linked entities

- **Chemicals:** pyrrole-2-carboxylic acid (PubChem CID 12473), acetonitrile (PubChem CID 6342)

## Full-text entities

- **Chemicals:** pyrrole-2-carboxylic acid (MESH:C002986), Ru (MESH:D012428), CHO (MESH:C034482), acetonitrile (MESH:C032159), (N,O)-[RuH(CO)(HL2)(PPh3)2] 4, 5 (-)
- **Species:** Escherichia coli (E. coli, species) [taxon 562], Staphylococcus aureus (species) [taxon 1280], Candida albicans (species) [taxon 5476]

## Full text

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## Figures

15 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11242957/full.md

## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC11242957/full.md

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Source: https://tomesphere.com/paper/PMC11242957