# Germline Sequencing of DNA Damage Repair Genes in Two Hereditary Prostate Cancer Cohorts Reveals New Disease Risk-Associated Gene Variants

**Authors:** Georgea R. Foley, James R. Marthick, Sionne E. Lucas, Kelsie Raspin, Annette Banks, Janet L. Stanford, Elaine A. Ostrander, Liesel M. FitzGerald, Joanne L. Dickinson

PMC · DOI: 10.3390/cancers16132482 · Cancers · 2024-07-07

## TL;DR

This study identifies new genetic risk variants in DNA repair genes linked to hereditary prostate cancer, which could help in developing targeted treatments.

## Contribution

The study discovers novel rare germline variants in DNA damage repair genes associated with prostate cancer risk.

## Key findings

- Rare ERCC3 and BRIP1 variants are significantly associated with prostate cancer risk.
- PARP2 and MUTYH variants show risk associations in separate datasets.
- No evidence of younger age or higher-grade disease in variant carriers.

## Abstract

An urgent demand exists to identify inherited genetic risk variants for prostate cancer (PrCa), particularly in DNA damage repair genes targetable with precision medicine-based strategies. Though the most heritable common cancer, discovery of rare germline PrCa risk variants is hampered by their low frequency, even in sizeable population datasets. Through utilising two large, independent, familial PrCa resources and their likely enrichment of rare causative variants, we provide robust evidence for several novel risk variants in DNA damage repair genes.

Rare, inherited variants in DNA damage repair (DDR) genes have a recognised role in prostate cancer (PrCa) susceptibility. In addition, these genes are therapeutically targetable. While rare variants are informing clinical management in other common cancers, defining the rare disease-associated variants in PrCa has been challenging. Here, whole-genome and -exome sequencing data from two independent, high-risk Australian and North American familial PrCa datasets were interrogated for novel DDR risk variants. Rare DDR gene variants (predicted to be damaging and present in two or more family members) were identified and subsequently genotyped in 1963 individuals (700 familial and 459 sporadic PrCa cases, 482 unaffected relatives, and 322 screened controls), and association analyses accounting for relatedness (MQLS) undertaken. In the combined datasets, rare ERCC3 (rs145201970, p = 2.57 × 10−4) and BRIP1 (rs4988345, p = 0.025) variants were significantly associated with PrCa risk. A PARP2 (rs200603922, p = 0.028) variant in the Australian dataset and a MUTYH (rs36053993, p = 0.031) variant in the North American dataset were also associated with risk. Evaluation of clinicopathological characteristics provided no evidence for a younger age or higher-grade disease at diagnosis in variant carriers, which should be taken into consideration when determining genetic screening eligibility criteria for targeted, gene-based treatments in the future. This study adds valuable knowledge to our understanding of PrCa-associated DDR genes, which will underpin effective clinical screening and treatment strategies.

## Linked entities

- **Genes:** ERCC3 (ERCC excision repair 3, TFIIH core complex helicase subunit) [NCBI Gene 2071], BRIP1 (BRCA1 interacting DNA helicase 1) [NCBI Gene 83990], PARP2 (poly(ADP-ribose) polymerase 2) [NCBI Gene 10038], MUTYH (mutY DNA glycosylase) [NCBI Gene 4595]
- **Diseases:** prostate cancer (MONDO:0005159)

## Full-text entities

- **Genes:** PARP2 (poly(ADP-ribose) polymerase 2) [NCBI Gene 10038] {aka ADPRT2, ADPRTL2, ADPRTL3, ARTD2, PARP-2, pADPRT-2}, ERCC3 (ERCC excision repair 3, TFIIH core complex helicase subunit) [NCBI Gene 2071] {aka BTF2, GTF2H, RAD25, Ssl2, TFIIH, TTD2}, BRIP1 (BRCA1 interacting DNA helicase 1) [NCBI Gene 83990] {aka BACH1, FANCJ, OF}, MUTYH (mutY DNA glycosylase) [NCBI Gene 4595] {aka MYH}
- **Diseases:** PrCa (MESH:D011471), cancers (MESH:D009369)
- **Mutations:** rs145201970, rs200603922, rs4988345, rs36053993

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11240467/full.md

## References

62 references — full list in the complete paper: https://tomesphere.com/paper/PMC11240467/full.md

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Source: https://tomesphere.com/paper/PMC11240467