Complete genome sequence of the Streptomyces bacteriophage Amabiko
Mark Milhaven, Heba A. Bakry, Anuvi Batra, Amanda M. Bermingham, Gloria Grama, Jacob Kebe, Shawn S. Martinez, Rishika V. Mudunuri, Megan R. Nelson, Evie T. Nguyen, Mia M. Peterson, Alexis Pruitt, Kristan Tran, Akarshi Brar, Gabriella Cerna, Elaine Chaffee, Steven M. Caruso
TL;DR
This paper presents the full genome sequence of the bacteriophage Amabiko, which infects a bacterium that causes potato scab.
Contribution
The paper provides the complete genome sequence and analysis of a new lytic bacteriophage, Amabiko.
Findings
Amabiko's genome is 131,414 bp with a 49.5% GC content.
The genome includes 245 protein-coding genes, 45 tRNAs, and one tmRNA.
Amabiko is closely related to the bacteriophage MindFlayer with 86.5% gene similarity.
Abstract
Amabiko is a lytic subcluster BE2 bacteriophage that infects Streptomyces scabiei—a bacterium causing common scab in potatoes. Its 131,414 bp genome has a GC content of 49.5% and contains 245 putative protein-coding genes, 45 tRNAs, and one tmRNA. Amabiko is closely related to Streptomyces bacteriophage MindFlayer (gene content similarity: 86.5%).
Genes, proteins, chemicals, diseases, species, mutations and cell lines named across the full text — each resolved to its canonical identifier and authoritative record.
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Taxonomy
TopicsBacteriophages and microbial interactions · Genomics and Phylogenetic Studies · Plant Virus Research Studies