# Nuclear and mitochondrial genomes of the plum fruit moth Grapholita funebrana

**Authors:** Li-Jun Cao, Fangyuan Yang, Jin-Cui Chen, Shu-Jun Wei

PMC · DOI: 10.1038/s41597-024-03522-7 · Scientific Data · 2024-06-26

## TL;DR

This paper presents the nuclear and mitochondrial genomes of the plum fruit moth, a pest affecting stone fruits, providing genetic resources for understanding its biology and evolution.

## Contribution

The study provides the first assembled nuclear and mitochondrial genomes of Grapholita funebrana using multiple sequencing technologies.

## Key findings

- The nuclear genome is 570.9 Mb with 51.28% repeats and 97.7% BUCSO completeness.
- The male karyotype is 2n = 56 with 17,979 protein-coding genes identified.
- The mitochondrial genome includes annotations for 13 protein-coding genes, 22 tRNAs, and 2 rRNA.

## Abstract

The plum fruit moth Grapholita funebrana (Tortricidae, Lepidoptera) is an important pest of many wild and cultivated stone fruits and other plants in the family Rosaceae. Here, we assembled its nuclear and mitochondrial genomes using Illumina, Nanopore, and Hi-C sequencing technologies. The nuclear genome size is 570.9 Mb, with a repeat rate of 51.28%, and a BUCSO completeness of 97.7%. The karyotype for males is 2n = 56. We identified 17,979 protein-coding genes, 5,643 tRNAs, and 94 rRNAs. We also determined the mitochondrial genome of this species and annotated 13 protein-coding genes, 22 tRNAs, and 2 rRNA. These genomes provide resources to understand the genetics, ecology, and genome evolution of the tortricid moths.

## Linked entities

- **Species:** Grapholita funebrana (taxon 568174), Rosaceae (taxon 3745)

## Full-text entities

- **Species:** Grapholita funebrana (species) [taxon 568174]

## Full text

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## Figures

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## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC11208415/full.md

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Source: https://tomesphere.com/paper/PMC11208415