# An SNP Marker Predicts Colorectal Cancer Outcomes with 5-Fluorouracil-Based Adjuvant Chemotherapy Post-Resection

**Authors:** Hao Chien, Yu-De Chu, Yi-Ping Hsu, Chau-Ting Yeh, Ming-Wei Lai, Ming-Ling Chang, Siew-Na Lim, Chun-Wei Chen, Wey-Ran Lin

PMC · DOI: 10.3390/ijms25126642 · International Journal of Molecular Sciences · 2024-06-17

## TL;DR

This study identifies a genetic marker that predicts better outcomes for colorectal cancer patients receiving 5-fluorouracil-based chemotherapy after surgery.

## Contribution

The study discovers a novel SNP (GALNT14-rs62139523) as a predictive biomarker for 5-FU-based adjuvant chemotherapy in intermediate-stage CRC patients.

## Key findings

- The GALNT14-rs62139523 'A/G' genotype is associated with improved overall and progression-free survival in CRC patients.
- The predictive significance of the SNP remains robust across multiple subgroups.
- Exceptions exist for specific demographic and clinical parameters like age and tumor characteristics.

## Abstract

Colorectal cancer (CRC) is a global health concern, necessitating adjuvant chemotherapy post-curative surgery to mitigate recurrence and enhance survival, particularly in intermediate-stage patients. However, existing therapeutic disparities highlight the need for biomarker-guided adjuvant chemotherapy to achieve better CRC inhibition. This study explores the molecular mechanisms underlying the inhibition of CRC through a genome-wide association study (GWAS) focused on 5-fluorouracil (5-FU)-based adjuvant therapy in intermediate-stage CRC patients, a domain previously unexplored. We retrospectively included 226 intermediate-stage CRC patients undergoing surgical resection followed by 5-FU-based adjuvant chemotherapy. The exploration cohort comprised 31 patients, and the validation cohort included 195 individuals. Genotyping was carried out using either Axiom Genome-Wide TWB 2.0 Array Plate-based or polymerase chain reaction-based methods on genomic DNA derived from collected tissue samples. Statistical analyses involved descriptive statistics, Kaplan–Meier analyses, and Cox proportional hazard analyses. From the GWAS, potential genetic predictors, GALNT14-rs62139523 and DNMBP-rs10786578 genotypes, of 5-FU-based adjuvant therapy following surgery in intermediate-stage CRC patients were identified. Validation in a larger cohort of 195 patients emphasized the predictive significance of GALNT14-rs62139523 genotypes, especially the “A/G” genotype, for improved overall and progression-free survival. This predictive association remained robust across various subgroups, with exceptions for specific demographic and clinical parameters such as age < 58 years old, CEA ≤ 2.5 ng/mL, tumor diameter > 44.0 mm, and tumor-free margin ≥ 50 mm. This study identifies that the GALNT14-rs62139523 “A/G” genotype modulates therapeutic outcomes, establishing it as a promising biomarker for predicting favorable responses to 5-FU-based adjuvant chemotherapy in intermediate-stage CRC patients, although further investigations are needed to detail these mechanisms.

## Linked entities

- **Genes:** GALNT14 (polypeptide N-acetylgalactosaminyltransferase 14) [NCBI Gene 79623], DNMBP (dynamin binding protein) [NCBI Gene 23268]
- **Chemicals:** 5-fluorouracil (PubChem CID 3385)
- **Diseases:** colorectal cancer (MONDO:0005575)

## Full-text entities

- **Genes:** GALNT14 (polypeptide N-acetylgalactosaminyltransferase 14) [NCBI Gene 79623] {aka GALNT15, GalNac-T10, GalNac-T14}, DNMBP (dynamin binding protein) [NCBI Gene 23268] {aka ARHGEF36, CTRCT48, TUBA}, CEACAM3 (CEA cell adhesion molecule 3) [NCBI Gene 1084] {aka CD66D, CEA, CGM1, CGM1a, W264, W282}
- **Diseases:** CRC (MESH:D015179), tumor (MESH:D009369)
- **Chemicals:** 5-FU (MESH:D005472)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** rs62139523, rs10786578

## Full text

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## Figures

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## References

65 references — full list in the complete paper: https://tomesphere.com/paper/PMC11203489/full.md

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Source: https://tomesphere.com/paper/PMC11203489