# Global biochemical profiling of fast-growing Antarctic bacteria isolated from meltwater ponds by high-throughput FTIR spectroscopy

**Authors:** Volha Akulava, Valeria Tafintseva, Uladzislau Blazhko, Achim Kohler, Uladzislau Miamin, Leonid Valentovich, Volha Shapaval

PMC · DOI: 10.1371/journal.pone.0303298 · PLOS ONE · 2024-06-17

## TL;DR

This study uses FTIR spectroscopy to analyze the biochemical profiles of Antarctic bacteria and how they change with different growth conditions.

## Contribution

The study demonstrates how FTIR spectroscopy can reveal temperature-specific biochemical changes in Antarctic bacteria.

## Key findings

- FTIR spectra strongly correlate with the phylogenetic relationships among the studied bacteria.
- Temperature had a species-specific impact on biochemical profiles, with polysaccharides being most affected.
- Pseudomonas lundensis and Acinetobacter lwoffii showed the most temperature-triggered biochemical changes.

## Abstract

Fourier transform infrared (FTIR) spectroscopy is a biophysical technique used for non-destructive biochemical profiling of biological samples. It can provide comprehensive information about the total cellular biochemical profile of microbial cells. In this study, FTIR spectroscopy was used to perform biochemical characterization of twenty-nine bacterial strains isolated from the Antarctic meltwater ponds. The bacteria were grown on two forms of brain heart infusion (BHI) medium: agar at six different temperatures (4, 10, 18, 25, 30, and 37°C) and on broth at 18°C. Multivariate data analysis approaches such as principal component analysis (PCA) and correlation analysis were used to study the difference in biochemical profiles induced by the cultivation conditions. The observed results indicated a strong correlation between FTIR spectra and the phylogenetic relationships among the studied bacteria. The most accurate taxonomy-aligned clustering was achieved with bacteria cultivated on agar. Cultivation on two forms of BHI medium provided biochemically different bacterial biomass. The impact of temperature on the total cellular biochemical profile of the studied bacteria was species-specific, however, similarly for all bacteria, lipid spectral region was the least affected while polysaccharide region was the most affected by different temperatures. The biggest temperature-triggered changes of the cell chemistry were detected for bacteria with a wide temperature tolerance such Pseudomonas lundensis strains and Acinetobacter lwoffii BIM B-1558.

## Linked entities

- **Species:** Pseudomonas lundensis (taxon 86185)

## Full-text entities

- **Chemicals:** agar (MESH:D000362), polysaccharide (MESH:D011134), lipid (MESH:D008055), BHI (-)
- **Species:** Pseudomonas lundensis (species) [taxon 86185], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11182503/full.md

## References

80 references — full list in the complete paper: https://tomesphere.com/paper/PMC11182503/full.md

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Source: https://tomesphere.com/paper/PMC11182503