# Cloning and sequencing analysis of whole Spiroplasma genome in yeast

**Authors:** Masaki Mizutani, Sawako Omori, Noriko Yamane, Yo Suzuki, John I. Glass, Ray-Yuan Chuang, Takema Fukatsu, Shigeyuki Kakizawa

PMC · DOI: 10.3389/fmicb.2024.1411609 · Frontiers in Microbiology · 2024-05-31

## TL;DR

Researchers cloned the entire genome of Spiroplasma chrysopicola in yeast, enabling future genetic studies and synthetic biology applications.

## Contribution

This study demonstrates the first successful whole genome cloning of Spiroplasma in yeast, expanding synthetic biology tools.

## Key findings

- The 1.12 Mbp Spiroplasma genome was successfully cloned in yeast.
- Cloned genomes had few mutations, averaging 1.2 nucleotides per clone.
- The cloned genomes are ready for further research and genetic modifications.

## Abstract

Cloning and transfer of long-stranded DNA in the size of a bacterial whole genome has become possible by recent advancements in synthetic biology. For the whole genome cloning and whole genome transplantation, bacteria with small genomes have been mainly used, such as mycoplasmas and related species. The key benefits of whole genome cloning include the effective maintenance and preservation of an organism's complete genome within a yeast host, the capability to modify these genome sequences through yeast-based genetic engineering systems, and the subsequent use of these cloned genomes for further experiments. This approach provides a versatile platform for in-depth genomic studies and applications in synthetic biology. Here, we cloned an entire genome of an insect-associated bacterium, Spiroplasma chrysopicola, in yeast. The 1.12 Mbp whole genome was successfully cloned in yeast, and sequences of several clones were confirmed by Illumina sequencing. The cloning efficiency was high, and the clones contained only a few mutations, averaging 1.2 nucleotides per clone with a mutation rate of 4 × 10−6. The cloned genomes could be distributed and used for further research. This study serves as an initial step in the synthetic biology approach to Spiroplasma.

## Linked entities

- **Species:** Spiroplasma chrysopicola (taxon 216933)

## Full-text entities

- **Species:** Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Mollicutes (mycoplasmas, class) [taxon 31969], Spiroplasma chrysopicola (species) [taxon 216933], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11176537/full.md

## References

39 references — full list in the complete paper: https://tomesphere.com/paper/PMC11176537/full.md

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Source: https://tomesphere.com/paper/PMC11176537