# Network Pharmacology and Experimental Validation to Explore the Potential Mechanism of Nigella sativa for the Treatment of Breast Cancer

**Authors:** Rawaba Arif, Shazia Anwer Bukhari, Ghulam Mustafa, Sibtain Ahmed, Mohammed Fahad Albeshr

PMC · DOI: 10.3390/ph17050617 · 2024-05-10

## TL;DR

This study explores how compounds from Nigella sativa may help treat breast cancer by combining network pharmacology and experiments.

## Contribution

The study identifies betulinic acid and stigmasterol as promising anticancer agents from Nigella sativa using a combined network pharmacology and experimental approach.

## Key findings

- Betulinic acid and stigmasterol showed strong binding to key breast cancer proteins and reduced cancer cell viability.
- In vivo tests confirmed that these compounds helped recover cancer markers in a rat model.
- Network analysis identified 10 hub genes related to breast cancer progression.

## Abstract

Breast cancer is a prevalent and potentially life-threatening disease that affects women worldwide. Natural products have gained attention as potential anticancer agents due to their fewer side effects, low toxicity, and cost effectiveness compared to traditional chemotherapy drugs. In the current study, the network pharmacology approach was used following a molecular docking study to evaluate the therapeutic potential of N. sativa-derived phytochemicals against breast cancer. Specifically, the study aimed to identify potential anticancer agents targeting key proteins implicated in breast cancer progression. Five proteins (i.e., EGFR, MAPK3, ESR1, MAPK1, and PTGS2) associated with breast cancer were selected as receptor proteins. Fourteen phytochemicals from N. sativa were prioritized based on drug-likeness (DL) and oral bioavailability (OB) parameters (with criteria set at DL > 0.18 and OB > 30%, respectively). Subsequent analysis of gene targets identified 283 overlapping genes primarily related to breast cancer pathogenesis. Ten hub genes were identified through topological analysis based on their significance in the KEGG pathway and GO annotations. Molecular docking revealed strong binding affinities between folic acid, betulinic acid, stigmasterol, and selected receptor proteins. These phytochemicals also demonstrated druggability potential. In vitro experiments in the MDA-MB-231 breast cancer cell line revealed that betulinic acid and stigmasterol significantly reduced cell viability after 24 h of treatment, confirming their anticancer activity. Furthermore, in vivo evaluation using a DMBA-induced rat model showed that betulinic acid and stigmasterol contributed to the significant recovery of cancer markers. This study aimed to explore the mechanisms underlying the anticancer potential of N. sativa phytochemicals against breast cancer, with the ultimate goal of identifying novel therapeutic candidates for future drug development. Overall, these results highlight betulinic acid and stigmasterol as promising candidates to develop novel anticancer agents against breast cancer. The comprehensive approach of this study, which integrates network pharmacology and molecular docking study and its experimental validation, strengthens the evidence supporting the therapeutic benefits of N. sativa-derived phytochemicals in breast cancer treatment, making them promising candidates for the development of novel anticancer agents against breast cancer.

## Linked entities

- **Genes:** EGFR (epidermal growth factor receptor) [NCBI Gene 1956], MAPK3 (mitogen-activated protein kinase 3) [NCBI Gene 5595], ESR1 (estrogen receptor 1) [NCBI Gene 2099], MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594], PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743]
- **Chemicals:** betulinic acid (PubChem CID 64971), stigmasterol (PubChem CID 5280794), folic acid (PubChem CID 135398658)
- **Diseases:** breast cancer (MONDO:0004989)

## Full-text entities

- **Genes:** MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, MAPK3 (mitogen-activated protein kinase 3) [NCBI Gene 5595] {aka ERK-1, ERK1, ERT2, HS44KDAP, HUMKER1A, P44ERK1}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, ESR1 (estrogen receptor 1) [NCBI Gene 2099] {aka ER, ESR, ESRA, ESTRR, Era, NR3A1}, PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743] {aka COX-2, COX2, GRIPGHS, PGG/HS, PGHS-2, PHS-2}
- **Diseases:** cancer (MESH:D009369), Breast Cancer (MESH:D001943), toxicity (MESH:D064420)
- **Chemicals:** stigmasterol (MESH:D013265), folic acid (MESH:D005492), DMBA (MESH:C082386), N. sativa (-), betulinic acid (MESH:D000094062)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116]
- **Cell lines:** MDA-MB-231 — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_0062)

## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11124279/full.md

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Source: https://tomesphere.com/paper/PMC11124279