# Epigenetically active chromatin in neonatal iWAT reveals GABPα as a potential regulator of beige adipogenesis

**Authors:** Raja Gopal Reddy Mooli, Bokai Zhu, Saifur R. Khan, Veerababu Nagati, Kulandaimanuvel Antony Michealraj, Michael J. Jurczak, Sadeesh K. Ramakrishnan

PMC · DOI: 10.3389/fendo.2024.1385811 · Frontiers in Endocrinology · 2024-05-03

## TL;DR

The study shows that epigenetic changes in neonatal fat tissue help form beige fat cells, with GABPα playing a key role in their development.

## Contribution

The study identifies GABPα as a novel regulator of neonatal beige adipogenesis through epigenetic activation.

## Key findings

- Neonatal beige adipocytes show increased H3K27ac at UCP1 and other beige genes in P20 mice.
- GABPα is enriched in epigenetically active regions and is required for beige adipocyte differentiation.
- Neonatal iWAT exhibits increased glycolytic activity during beige adipogenesis.

## Abstract

Thermogenic beige adipocytes, which dissipate energy as heat, are found in neonates and adults. Recent studies show that neonatal beige adipocytes are highly plastic and contribute to >50% of beige adipocytes in adults. Neonatal beige adipocytes are distinct from recruited beige adipocytes in that they develop independently of temperature and sympathetic innervation through poorly defined mechanisms.

We characterized the neonatal beige adipocytes in the inguinal white adipose tissue (iWAT) of C57BL6 postnatal day 3 and 20 mice (P3 and P20) by imaging, genome-wide RNA-seq analysis, ChIP-seq analysis, qRT-PCR validation, and biochemical assays.

We found an increase in acetylated histone 3 lysine 27 (H3K27ac) on the promoter and enhancer regions of beige-specific gene UCP1 in iWAT of P20 mice. Furthermore, H3K27ac ChIP-seq analysis in the iWAT of P3 and P20 mice revealed strong H3K27ac signals at beige adipocyte-associated genes in the iWAT of P20 mice. The integration of H3K27ac ChIP-seq and RNA-seq analysis in the iWAT of P20 mice reveal epigenetically active signatures of beige adipocytes, including oxidative phosphorylation and mitochondrial metabolism. We identify the enrichment of GA-binding protein alpha (GABPα) binding regions in the epigenetically active chromatin regions of the P20 iWAT, particularly on beige genes, and demonstrate that GABPα is required for beige adipocyte differentiation. Moreover, transcriptomic analysis and glucose oxidation assays revealed increased glycolytic activity in the neonatal iWAT from P20.

Our findings demonstrate that epigenetic mechanisms regulate the development of peri-weaning beige adipocytes via GABPα. Further studies to better understand the upstream mechanisms that regulate epigenetic activation of GABPα and characterization of the metabolic identity of neonatal beige adipocytes will help us harness their therapeutic potential in metabolic diseases.

## Linked entities

- **Genes:** UCP1 (uncoupling protein 1) [NCBI Gene 7350], GABPA (GA binding protein transcription factor subunit alpha) [NCBI Gene 2551]

## Full-text entities

- **Genes:** GABPA (GA binding protein transcription factor subunit alpha) [NCBI Gene 2551] {aka E4TF1-60, E4TF1A, NFT2, NRF2, NRF2A, RCH04A07}, UCP1 (uncoupling protein 1) [NCBI Gene 7350] {aka SLC25A7, UCP}
- **Diseases:** metabolic diseases (MESH:D008659)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC11099907/full.md

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11099907/full.md

## References

56 references — full list in the complete paper: https://tomesphere.com/paper/PMC11099907/full.md

---
Source: https://tomesphere.com/paper/PMC11099907