# Regulatory features of Candida albicans hemin-induced filamentation

**Authors:** Liping Xiong, Katharina Goerlich, Aaron P Mitchell

PMC · DOI: 10.1093/g3journal/jkae053 · G3: Genes|Genomes|Genetics · 2024-03-12

## TL;DR

This study explores how the fungus Candida albicans responds to hemin, a blood component, by forming hyphae, which are important for causing infections.

## Contribution

The study identifies new insights into hemin-induced filamentation and its genetic regulation in Candida albicans.

## Key findings

- The strength of hemin-induced filamentation varies among C. albicans strains.
- Hemin induces biofilm formation in some isolates.
- Hemin and pH-dependent filamentation share 72 upregulated genes, with only 16 overlapping with known hypha-associated genes.

## Abstract

Candida albicans is a prominent fungal pathogen that can infect the bloodstream and deep tissues. One key pathogenicity trait is the ability to transition between yeast and hyphal growth. Hyphae are critical for the formation of biofilms, which in turn enable device-associated infection. Among signals that drive hypha formation is the presence of hemin, an oxidized Fe(III)-containing heme derivative found in blood. In this study, we asked 4 questions. First, how uniform is the filamentation response to hemin among C. albicans strains? We tested 26 diverse isolates and found that the strength of a strain's filamentation response to hemin reflected its filamentation level in the absence of hemin. Second, does hemin induce biofilm formation? Hemin biofilm induction was evident in 5 out of 10 isolates tested, including most of the weaker biofilm formers tested. Third, what is the gene expression response to hemin? We compared RNA-seq data for type strain SC5314 grown in pH 5.5 minimal media with or without hemin. We also compared that response to SC5314 grown in pH 7.0 minimal media, where it undergoes well-studied pH-dependent filamentation. We found a common set of 72 genes with upregulated RNA levels in response to both signals, including many known hypha-associated genes. Surprisingly, overlap among those 72 genes with 2 recent consensus definitions of hypha-associated genes was limited to only 16 genes. Fourth, which regulators govern hemin-induced filamentation? A mutant survey indicated that the response depends upon filamentation regulators Efg1, Brg1, and Rim101, but not upon heme acquisition regulator Hap1 or its target genes HMX1, RBT5, PGA10, PGA7, and CSA2. These findings argue that hemin induces hypha formation independently of its utilization.

## Linked entities

- **Genes:** GFM1 (G elongation factor mitochondrial 1) [NCBI Gene 85476], SMARCA4 (SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4) [NCBI Gene 6597], RIM101 (alkaline-responsive transcriptional regulator RIM101) [NCBI Gene 856358], HAP1 (huntingtin associated protein 1) [NCBI Gene 9001], HMX1 (H6 family homeobox 1) [NCBI Gene 3166], RBT5 (Rbt5p) [NCBI Gene 3645007], PGA10 (Pga10p) [NCBI Gene 3645009], PGA7 (Pga7p) [NCBI Gene 2913621], IK (IK cytokine) [NCBI Gene 3550]
- **Chemicals:** hemin (PubChem CID 26945), Fe(III) (PubChem CID 29936)
- **Species:** Candida albicans (taxon 5476), Mus musculus (taxon 10090)

## Full-text entities

- **Diseases:** infection (MESH:D007239)
- **Chemicals:** hemin (MESH:D006427), heme (MESH:D006418), Fe(III) (-)
- **Species:** Candida albicans SC5314 (strain) [taxon 237561], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Candida albicans (species) [taxon 5476]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11075532/full.md

## References

26 references — full list in the complete paper: https://tomesphere.com/paper/PMC11075532/full.md

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Source: https://tomesphere.com/paper/PMC11075532