# Potentiating Activity of GmhA Inhibitors on Gram-Negative Bacteria

**Authors:** François Moreau, Dmytro Atamanyuk, Markus Blaukopf, Marek Barath, Mihály Herczeg, Nuno M. Xavier, Jérôme Monbrun, Etienne Airiau, Vivien Henryon, Frédéric Leroy, Stéphanie Floquet, Damien Bonnard, Robert Szabla, Chris Brown, Murray S. Junop, Paul Kosma, Vincent Gerusz

PMC · DOI: 10.1021/acs.jmedchem.4c00037 · 2024-04-10

## TL;DR

This paper explores new inhibitors that enhance antibiotic effectiveness against Gram-negative bacteria by targeting a key enzyme in heptose biosynthesis.

## Contribution

The study introduces novel GmhA inhibitors that potentiate antibiotics without direct antibacterial activity.

## Key findings

- N-formyl hydroxamate inhibitors bind to GmhA's Zn2+ ion and inhibit heptosylation in Gram-negative bacteria.
- These inhibitors potentiate erythromycin and rifampicin in Escherichia coli.
- The compounds show no HepG2 cytotoxicity or direct antibacterial activity.

## Abstract

Inhibition of the biosynthesis of bacterial heptoses
opens novel
perspectives for antimicrobial therapies. The enzyme GmhA responsible
for the first committed biosynthetic step catalyzes the conversion
of sedoheptulose 7-phosphate into d-glycero-d-manno-heptose 7-phosphate and harbors
a Zn2+ ion in the active site. A series of phosphoryl-
and phosphonyl-substituted derivatives featuring a hydroxamate moiety
were designed and prepared from suitably protected ribose or hexose
derivatives. High-resolution crystal structures of GmhA complexed
to two N-formyl hydroxamate inhibitors confirmed
the binding interactions to a central Zn2+ ion coordination
site. Some of these compounds were found to be nanomolar inhibitors
of GmhA. While devoid of HepG2 cytotoxicity and antibacterial activity
of their own, they demonstrated in vitro lipopolysaccharide heptosylation
inhibition in Enterobacteriaceae as
well as the potentiation of erythromycin and rifampicin in a wild-type Escherichia coli strain. These inhibitors pave the
way for a novel treatment of Gram-negative infections.

## Linked entities

- **Proteins:** gmhA (phosphoheptose isomerase)
- **Chemicals:** erythromycin (PubChem CID 12560), rifampicin (PubChem CID 135398735), Zn2+ (PubChem CID 32051)
- **Species:** Enterobacteriaceae (taxon 543), Escherichia coli (taxon 562)

## Full-text entities

- **Diseases:** cytotoxicity (MESH:D064420), infections (MESH:D007239)
- **Chemicals:** erythromycin (MESH:D004917), N-formyl hydroxamate (-), rifampicin (MESH:D012293), hexose (MESH:D006601), ribose (MESH:D012266), sedoheptulose 7-phosphate (MESH:C020495), lipopolysaccharide (MESH:D008070), heptoses (MESH:D006539)
- **Species:** Escherichia coli (E. coli, species) [taxon 562]
- **Cell lines:** HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027)

## Figures

17 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11056994/full.md

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Source: https://tomesphere.com/paper/PMC11056994