Trophic Niche Differentiation in Two Sympatric Nuthatch Species (Sitta yunnanensis and Sitta nagaensis)
Qiang Guo, Xi Lu, Chongxin Xie, Jiansong Zhang, Xianyin Xu, Yuhan Qian, Xu Luo, Yubao Duan

TL;DR
This study uses stable isotopes to show how two similar nuthatch species coexist by having different diets and feeding habits.
Contribution
The study reveals trophic niche differentiation in two sympatric nuthatch species through stable isotope analysis.
Findings
S. yunnanensis and S. nagaensis share similar diets but differ in foraging proportions and habitat use.
S. yunnanensis has a wider isotopic niche, suggesting broader feeding habitats and reduced competition.
Trophic niche differentiation supports coexistence through resource partitioning.
Abstract
Trophic niches, as one of the important dimensions of niche theory, show the nutritional requirements of species; they can reflect their position in the ecosystem trophic level, and functional status, as well as the nutritional relationships between species. Similarities in body structure and ecological needs may lead to interspecific nutritional competition, and species may undergo niche differentiation through different foraging strategies. The body tissues of consumers contain stable isotope signatures that reflect their dietary information, and stable isotope analysis has been widely used in animal diet research. In this study, stable isotope techniques were used to assess the dietary information and nutritional niches of Sitta yunnanensis and Sitta nagaensis coexisting in Yunnan Province. S. yunnanensis and S. nagaensis mainly preyed on six orders, including Orthoptera, with…
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Figure 4- —National Natural Science Foundation of China
- —Provincial Science and Technology Project of Yunnan
- —First Class Forestry Academic Subject in Yunnan Province
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Taxonomy
TopicsAvian ecology and behavior · Animal Ecology and Behavior Studies · Wildlife Ecology and Conservation
1. Introduction
The coexistence of closely related sympatric species has been a core topic in the maintenance of biodiversity and community ecology [1,2,3]. The close phylogenetic relationships between closely related species often result in morphological similarities, leading to similar dietary strategies and ecological requirements [4]. For sympatric closely related species with similar ecological requirements, stable coexistence can only be achieved by reducing overlap in the use of limited resources [5]. At present, there are many theories or hypotheses existing to explain the mechanism behind species coexistence, among which the niche differentiation hypothesis is the most prevailing [6,7]. The niche differentiation hypothesis states that the body structure, behavior, and resource needs of related sympatric species are very similar, and niche separation is conducive to reducing competition, playing an important role in stable coexistence [8,9]. Two species with completely overlapping ecological niches cannot co-exist in the same domain for a long time [10]. Differentiation in at least one dimension is needed to achieve stable co-existence, such as temporal or trophic niche differentiation [11,12,13,14]. Sympatric species may achieve trophic niche separation by foraging for different foods, at different places, or at different times [15]. As one of the important dimensions of niche theory, the study of trophic niches is very important for understanding the coexistence mechanisms and ecology of closely related species to improve conservation strategies [16].
In birds, trophic niche studies usually use direct observation [17] and gastrointestinal content analysis [18]; these methods require substantial time and manpower, conflict with non-invasive studies of endangered wildlife, and can only identify a small percentage of food resources [4,19]. Compared to traditional methods, stable isotope analysis overcomes these limitations to evaluate the dietary composition of consumers using tissue synthesis based on the metabolic activity on different time scales [19,20]. In birds, feathers remain metabolically inert, and keratin in feathers stops isotope fractionation; because of this, the isotopic information recorded in feather tissue reflects the dietary composition during molting the previous year [21,22]. In addition, isotopic niches can be calculated based on different elements. δ^13^C changes little in the process of food chain transmission and is often used to represent food sources and habitat, while δ^15^N is highly enriched between trophic levels and is commonly used to evaluate the trophic level of the consumer; the combination of δ^13^C and δ^15^N can be used to analyze consumers’ consumption of food resources [23,24,25].
The Yunnan Nuthatch (Sitta yunnanensis) and Chestnut-vented Nuthatch (S. nagaensis) are closely related species with similar morphology, including plumage pattern, body size, and bill shape [26]. S. yunnanensis and S. nagaensis inhabit coniferous and mixed-coniferous forests at altitudes of 1500–3000 m [27]. Both species inhabit the same habitat and feed on insects on tree trunks in the Zixishan Provincial Nature Reserve, Yunnan Province. Due to their similar morphology and eating habits and their stable co-existence in the study area, they likely share resources. The main goal of this study was to understand the feeding ecology of S. yunnanensis and S. nagaensis to evaluate their trophic niches and food resource partitioning. Feathers were collected from S. yunnanensis and S. nagaensis, along with potential food samples and differences in their δ^13^C and δ^15^N values, which were examined to analyze their feeding ecology. It was hypothesized that S. yunnanensis and S. nagaensis both feed on similar food resources but at different proportions, which would be reflected in the δ^13^C and δ^15^N values; they were expected to have differentiated trophic niche, which would be reflected in their isotopic niche overlaps.
2. Materials and Methods
2.1. Study Area
The Zixi Mountain Provincial Nature Reserve of Yunnan Province is located southwest of Chuxiong City, Yunnan Province, China at 101°22′–101°26′ E and 24°58′–25°04′ N, with an altitude of 1950–2502 m and a total area of 160 km^2^ [27]. The reserve is a narrow strip of hilly land running from north to south with east and west slopes, most of which is located on the upper part of the mountain. The highest point is the main peak of Zixi Mountain, and the lowest point is the exit of the Maji River. The reserve area is located in the monsoon belt of the northern subtropical plateau, and experiences significant seasonal changes; the summer has abundant rainfall and high temperatures, while the winter is relatively dry with low temperatures. The annual average precipitation is 900 mm, with a rainy season from May to October and a dry season from November to April. The average annual temperature is 12.1–14.9 °C [27]. The vegetation types in the protected area are secondary coniferous and mixed coniferous forests. The forest types are predominantly Yunnan and Huashan Pine forests.
2.2. Sample Collection
2.2.1. Bird Feather Collection
In this study, feathers from S. yunnanensis and S. nagaensis were collected in the study area from December 2018 to May 2019. Feathers from 13 individuals of S. nagaensis and 22 individuals of S. Yunnanensis were collected (including five young S. nagaensis). The mist nets used collects about 1 cm^2^ cm from the outermost tip of the blade of each adult bird’s tenth primary feather (P10) before releasing it [28]. In addition, the feathers of young birds (about 16 days old) were collected. To avoid influencing feather regeneration in nestlings, the feathers collected were clipped 1 cm from the feather tip and put into a Ziploc bag for storage in a portable refrigerator. After sampling, adult birds were promptly released, and nestlings were promptly put back into their nest. Samples were brought back to the laboratory and refrigerated at −20 °C for subsequent analyses [29].
2.2.2. Food Source Sample Collection
During the rearing period of S. yunnanensis and S. nagaensis, two methods were used to determine food sources without disrupting normal activities. For S. nagaensis, a digital camera (7D2, Canon, Japan) was used to take high-resolution photographs of birds during feeding at a distance of 10 m from the nest cavity entrance. Based on morphological characteristics, the photos were used to identify food items to the order level by referring to the Chinese Insect Atlas [30], the Chinese Insect Ecology Atlas [31], and the Insect Family Tree [32].
Based on photos and field observations, potential food insect samples were collected by net trapping in the area near the breeding nests of the two species. After the insects were collected, they were sealed in a collection bottle or Ziplock bag and stored in a portable refrigerated box. They were taken to the laboratory for identification and used for stable isotope analyses [29].
2.3. Sample Processing and Testing
The feather samples were taken to the laboratory to remove impurities. Since degreasing would affect the nitrogen isotope value, the treated feather samples were divided into two parts: one was degreased to determine the stable carbon isotope value and the other was used directly to determine the stable nitrogen isotope value [33]. All samples were sent to ShenZhen Huake JingXin Detection Technology Company for testing the stable isotope ratios of carbon and nitrogen using a DELTA V Advantage Isotope Ratio Mass Spectrometer (Isotope Ratio Mass Spectrometer, Thermo Fisher Scientific, Inc., Bremen, Germany) and EA-HT Element analyzer (Thermo Fisher Scientific, Inc., Bremen, Germany).
2.4. Data Processing
Accuracy was ≤0.5% for C%, ≤0.1‰ for δ13C, ≤0.5% for N%, and ≤0.2‰ for δ15N. The natural abundance of stable carbon and nitrogen isotopes (enrichment) was expressed as follows:
where δX is δ^13^C or δ^15^N, R_sample_ is the isotope ratio ^13^C/^12^C or ^15^N/^14^N of the measured sample, and R_standard_ is the ^13^C/^12^C or ^15^N/^14^N ratio of the reference material. The δ^13^C value was reported relative to the international reference material PDB (R scale = 0.0112372) and the δ^15^N value was relative to standard atmospheric nitrogen (R scale = 0.0036765).
The Bayesian stable isotope mixing model in the R package “MixSiar” was used to calculate the dietary contributions of different food resources for both species [4,34]. The average δ^13^C and δ^15^N values of the food source samples, and the δ^13^C and δ^15^N values of the S. yunnanensis and S. nagaensis feathers were input into the R package “SIAR”. After applying nutrient enrichment factors for carbon and nitrogen, the model was fitted to determine the relative contributions of various food sources [35]. The isotopic niches of S. yunnanensis and S. nagaensis were calculated using stable isotope Bayes ellipses in the R package “SIBER” [35]. The total convex hull area (TA) and corrected standard elliptic area (SEAc) were used to quantify isotopic niche width and calculate their overlap [35]. The enrichment factors for carbon and nitrogen stable isotopes could not be obtained in the laboratory owing to limitations in the experimental conditions. Accordingly, estimates from a meta-analysis by Post et al. (2002) were used (Δ^13^C = 0.4 ± 1.3‰ and Δ^15^N = 3.4 ± 1‰); these values are widely applicable to most ecosystems [36].
Statistical analyses were performed using Excel 2010 and R (Version 4.2.2). The stable isotope values (δ^13^C and δ^15^N) of different food sources and different bird samples were compared by one-way analysis of variance. All isotopic data are expressed as mean ± SD, and p < 0.05 was considered significant [35].
3. Results
3.1. Stable Isotope Characteristics of Food Sources
Insects belonging to six orders were identified in 45 out of a total of 144 photographs of birds during feeding. Diptera, Orthoptera, and Lepidoptera were most frequently observed. Both S. yunnanensis and S. nagaensis consumed insects belonging to all six orders; however, the number of insects was not recorded for S. nagaensis.
Six items from 47 foods were collected in the study area. The carbon (C‰) content of these six potential food sources ranged from 47.24‰ to 69.48‰, while the nitrogen (N‰) content ranged from 3.94‰ to 12.50‰ (Table S1). The δ^13^C values ranged from −23.98‰ to −29.18‰, with the highest values for Orthoptera and the lowest values for Lepidoptera. The δ^15^N values ranged from 0.90‰ to 3.97‰, with the highest values for Coleoptera at 3.97‰ and the lowest values for Orthoptera at 0.90‰ (Table 1).
3.2. Stable Isotope Results for S. yunnanensis and S. nagaensis Samples
The δ^13^C values for S. yunnanensis feather samples (n = 22) ranged from −22.68‰ to −19.78‰, with an average of −20.95 ± 0.77‰; the δ^15^N values ranged from 2.01‰ to 5.58‰, with an average value of 3.67 ± 1.07‰ (Figure 1 and Table S2). Since there were no significant differences in δ^13^C and δ^15^N between features of adult birds (n = 8) and baby birds (n = 5) (p > 0.05), an integrated analysis showed that δ^13^C values of S. nagaensis feathers (n = 13) ranged from −24.10‰ to −21.59‰, with an average of −23.24 ± 0.81‰, while δ^15^N values ranged from 2.86‰ to 4.58‰, with an average value of 3.50 ± 0.54‰ (Figure 1 and Table S2).
The δ^13^C values of S. yunnanensis and S. nagaensis feathers were significantly different (p < 0.001), indicating that food resources were differentiated and feeding niches were separated. There was no significant difference in δ^15^N values (p = 0.59), indicating that the species occupied the same trophic position (Figure 1).
3.3. Food Source Composition from S. yunnanensis and S. nagaensis Feathers
Stable isotope analysis of feathers of S. yunnanensis and S. nagaensis showed that the cumulative contribution rate of insects in the six orders to their diet reached 99.97% (Table 1). Although not all food species were collected, the results effectively reflect the composition and contribution rate of the main food sources. The contribution rates of food sources in feather samples from S. yunnanensis were as follows: Orthoptera > Hemiptera > Coleoptera > Hymenoptera > Diptera > Lepidoptera; for S. nagaensis the order was Orthoptera > Hemiptera > Hymenoptera > Coleoptera > Diptera > Lepidoptera. The contribution rate of Orthoptera to the diet of S. yunnanensis based on feather samples was as high as 78.69%, while its contribution to the diet of S. nagaensis was 45.56%, indicating that it was an important food source for both species (Figure 2 and Figure 3, Table 1). Lepidoptera had the lowest dietary contribution rates 2.29% for S. yunnanensis and 4.12% for S. nagaensis (Figure 2 and Figure 3, Table 1).
3.4. Niche Relationships Reflected by Feather Samples from S. yunnanensis and S. nagaensis
Bayes standard ellipses of the trophic niches of S. yunnanensis and S. nagaensis were fitted with δ^15^N as the horizontal coordinate and δ^13^C as the vertical coordinate (Figure 4). The total vegetative niche area (TA) and correctional ellipse area (SEAc) of S. yunnanensis were both larger than those of S. nagaensis, and there was no overlap between the correctional ellipses, indicating that there was differentiation between the niches of the two species. The niche width of S. yunnanensis (2.69‰^2^) was larger than that of S. nagaensis (0.73‰^2^), indicating that S. yunnanensis had a wider feeding range (Table 2, Figure 4).
4. Discussion
In this study, new information on the trophic ecology of the sympatric coexistence of S. yunnanensis and S. nagaensis was identified. As hypothesized, stable isotope analysis showed that S. yunnanensis and S. nagaensis shared similar diets and trophic niche differentiation within the study area, though S. yunnanensis (2.69‰^2^) had a wider ecological niche than S. nagaensis (0.73‰^2^).
Orthoptera, Hemiptera, Hymenoptera, Coleoptera, Diptera, and Lepidoptera were found to be common food source of S. yunnanensis and S. nagaensis (Table 1 and Figure 2 and Figure 3), as the cumulative contribution rate of the six orders of insects to the diets of both species reached 99.97% (Table 1). This was consistent with field observations showing that S. yunnanensis and S. nagaensis are primarily insectiorous and rarely eat plants. This is why the results reflect the food sources and contribution rates of the two nuthatches, even though samples were not collected from all food sources. The insect prey composition of S. yunnanensis and S. nagaensis overlapped, which is consistent with the results seen for Sitta tephronota and Sitta neumayer, based on gastrointestinal tract content analysis [5]. Although the insects in the diets of S. yunnanensis and S. nagaensis were the same at the order level, the proportions of each component differed significantly; S. yunnanensis fed predominantly on Orthoptera (78.69%), Hemiptera (7.76%), and Coleoptera (3.96%), while S. nagaensis fed mainly on Orthoptera (45.56%), Hemiptera (22.41%), and Hymenoptera (9.56%). These results differ from those for S. neumayer, which primarily preyed on Coleopterans, Hemipterans, and Lepidopterans [5]. In our study, Lepidopterans were not identified as a main food for either S. yunnanensis or S. nagaensis (Table 1), which may be caused by different research methods. Stable isotope analysis mainly reflects the actual intake, digestion, and assimilation information of food, while gastrointestinal content analysis mainly reflects information on food intake. The overlapping of food resources between S. yunnanensis and S. nagaensis is consistent with the adoption of strategies for food resources observed in other sympatric species. For example, a feather isotope analysis of three sympatric species of closely related seabirds revealed substantial overlap in food resources [21], and Australian snubfin and humpback dolphins that co-exist in the same domain have overlapping dietary resources but different dietary preferences [37].
Based on the theory of competition, S. yunnanensis and S. nagaensis were hypothesized to exhibit isotopic niche differentiation, enabling them to coexist stably. The isotope niche showed separation between the trophic niches of S. yunnanensis and S. nagaensis (Figure 4), indicating that differentiation existed in feeding ratios. In addition, S. yunnanensis and S. nagaensis show differentiation in breeding times in the field; S. yunnanensis breeds much earlier than S. nagaensis (unpublished data), which may be a reproductive strategy to reduce competition for food resources and improve reproductive success. Niche differentiation plays an important role in the coexistence of closely related species, related species usually have similar functional traits and ecological habits and may exhibit interspecific competition due to niche overlap when resources are limited. The niche differentiation hypothesis predicts that species with niche overlap must show niche differentiation to coexist stably [38], while the niche compensation theory suggests that differentiation must occur in at least one of the three dimensions: time, space, and food [14,39]. In this study, sympatrically coexisting trophic niche differentiation of S. yunnanensis and S. nagaensis was found to help reduce competition for limited food resources to help achieve coexistence. This is the same feeding strategy as the sympatric harp seal (Pagophilus groenlandicus) and ringed seal (Pusa hispida); they differ in terms of prey species proportions and size composition, reducing the degree of realized niche overlap [40]. In this study, there was a difference in the percentages of food consumed. This feeding strategy has also been reported in other coexisting animals, in mantled and black howler monkeys in allopatry, their isotopic niches are similar, but the niches of sympatric populations are separated [15]. A study of two giant petrels (Macronectes spp.) using stable isotopes and remote sensing tracking techniques found a high degree of overlap in food resources but differentiation in trophic niche and foraging habitat [41], the results of the present study are consistent with this. The evidence of trophic niche partitioning between S. yunnanensis and S. nagaensis supports the niche differentiation hypothesis.
The food contribution rates of S. nagaensis differed substantially between direct observation and stable isotope analysis. Direct observations revealed that the contribution rates of Diptera, Orthoptera, and Lepidoptera were highest, while stable isotope analysis showed that the contribution rates of Orthoptera, Hemiptera, and Hymenoptera were highest. This difference can be explained by methodological differences; stable isotope analyses reflect the food resources assimilated by animals rather than the food consumed by animals [42,43], while the direct observation method records food resources that are consumed. Lepidoptera had the lowest contribution rate in the stable isotope analysis (2.29% for S. yunnanensis and 4.12% for S. nagaensis). Most Lepidoptera found were small butterflies, moths, or larvae. It has been found that the stable isotope values of animals increase as size increases [19], and the small number of lepidopteran individuals consumed may explain their low contribution rate in the stable isotope analysis.
The δ^15^N isotope niche space between species changes in response to different trophic levels of foraging. In this study, there was no significant difference in δ^15^N between S. yunnanensis and S. nagaensis (p > 0.05), indicating that they were in the same trophic level. However, the trophic niche of S. yunnanensis (2.69‰^2^) was larger than that of S. nagaensis (0.73‰^2^). The trophic niche breadth occupied by a species in an ecosystem represents its utilization of all available resources, and the isotopic niche breadth varies among species [40]. The larger the width, the stronger the utilization and competition ability of food resources [44,45]. These results indicated that S. yunnanensis had stronger utilization and competitive ability, with relatively broad food sources. In a community or ecosystem, differences in feeding habits and habitat among species will lead to differentiation in trophic niches, and overlap in food resources is expected in closely related sympatric species due to the similarity in body structure. Despite this, competition can be reduced through spatial or temporal differentiation in habitat use [46,47]. Future studies of closely related sympatric species should be combined with multi-dimensional explorations of their ecological niches for a more comprehensive understanding of the mechanism underlying their coexistence.
5. Conclusions
Sympatric closely related species can reduce competition by allocating resources along spatial, dietary, and temporal axes. In this study, a stable isotope analysis of feathers and potential feeding sources of the sympatric nuthatches S. yunnanensis and S. nagaensis was performed. The results showed that the two species occupied the same trophic level. In terms of food resources, the two species overlapped and achieved food niche differentiation through differences in feeding ratios, reducing competition and achieving stable coexistence. Compared with S. nagaensis, S. yunnanensis had better utilization and competitive ability for food resources with a relatively large trophic niche. Ecological niche establishment of sympatric closely related species often involves interspecific interactions across nutritional, temporal, and spatial dimensions. The coexistence of similar species may be regulated through various dimensions, and this process is dynamic. Future research on the coexistence mechanisms of sympatric closely related species should consider integrating multiple dimensions, such as nutritional, temporal, and spatial dimensions, to achieve a more comprehensive understanding of coexistence mechanisms.
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