# RNA-seq analysis-based study on the effects of gestational diabetes mellitus on macrosomia

**Authors:** Qianqian Gao, Guanying Xu, Guijie Wang, Wei Wang, Chao Zhu, Yang Shi, Changzhuang Guo, Jing Cong, Hongxia Ming, Dongmei Su, Xu Ma

PMC · DOI: 10.3389/fendo.2024.1330704 · Frontiers in Endocrinology · 2024-04-10

## TL;DR

This study uses RNA-seq to explore how hyperglycemia in pregnant mothers increases the risk of macrosomia in infants.

## Contribution

Identifies 74 overlapping genes and 10 hub genes linking hyperglycemia and macrosomia, emphasizing the role of nucleolar stress.

## Key findings

- Hyperglycemic mothers show 3207 differentially expressed genes compared to normal mothers.
- Nucleolar stress is a key factor in macrosomia, as revealed by KEGG and GO analyses.
- Ten hub genes (e.g., RPL36, RPS29) are critical in the increased macrosomia risk in hyperglycemic pregnancies.

## Abstract

Both the mother and the infant are negatively impacted by macrosomia. Macrosomia is three times as common in hyperglycemic mothers as in normal mothers. This study sought to determine why hyperglycemic mothers experienced higher macrosomia. Methods: Hematoxylin and Eosin staining was used to detect the placental structure of normal mother(NN), mothers who gave birth to macrosomia(NM), and mothers who gave birth to macrosomia and had hyperglycemia (DM). The gene expressions of different groups were detected by RNA-seq. The differentially expressed genes (DEGs) were screened with DESeq2 R software and verified by qRT-PCR. The STRING database was used to build protein-protein interaction networks of DEGs. The Cytoscape was used to screen the Hub genes of the different group.

The NN group’s placental weight differed significantly from that of the other groups. The structure of NN group’s placenta is different from that of the other group, too. 614 and 3207 DEGs of NM and DM, respectively, were examined in comparison to the NN group. Additionally, 394 DEGs of DM were examined in comparison to NM. qRT-PCR verified the results of RNA-seq. Nucleolar stress appears to be an important factor in macrosomia, according on the results of KEGG and GO analyses. The results revealed 74 overlapped DEGs that acted as links between hyperglycemia and macrosomia, and 10 of these, known as Hub genes, were key players in this process. Additionally, this analysis believes that due of their close connections, non-overlapping Hubs shouldn’t be discounted.

In diabetic mother, ten Hub genes (RPL36, RPS29, RPL8 and so on) are key factors in the increased macrosomia in hyperglycemia. Hyperglycemia and macrosomia are linked by 74 overlapping DEGs. Additionally, this approach contends that non-overlapping Hubs shouldn’t be ignored because of their tight relationships.

## Linked entities

- **Genes:** RPL36 (ribosomal protein L36) [NCBI Gene 25873], RPS29 (ribosomal protein S29) [NCBI Gene 6235], RPL8 (ribosomal protein L8) [NCBI Gene 6132]
- **Diseases:** gestational diabetes mellitus (MONDO:0005406)

## Full-text entities

- **Genes:** ELAVL2 (ELAV like RNA binding protein 2) [NCBI Gene 1993] {aka HEL-N1, HELN1, HUB}, RPL8 (ribosomal protein L8) [NCBI Gene 6132] {aka L8, uL2}, RPL36 (ribosomal protein L36) [NCBI Gene 25873] {aka L36, eL36}, RPS29 (ribosomal protein S29) [NCBI Gene 6235] {aka DBA13, S29, uS14}
- **Diseases:** gestational diabetes mellitus (MESH:D016640), hyperglycemic (MESH:D006944), Hyperglycemia (MESH:D006943), NM (MESH:C536816), Macrosomia (MESH:D005320), diabetic (MESH:D003920), DM (MESH:D009223)
- **Chemicals:** Hematoxylin (MESH:D006416)

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC11039845/full.md

## References

27 references — full list in the complete paper: https://tomesphere.com/paper/PMC11039845/full.md

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Source: https://tomesphere.com/paper/PMC11039845