# Determination of internal controls for quantitative gene expression of Spodoptera litura under microbial pesticide stress

**Authors:** Shuang Wu, Yunmi Luo, Zhihong Zeng, Ying Yu, Shicai Zhang, Yan Hu, Lei Chen

PMC · DOI: 10.1038/s41598-024-56724-9 · Scientific Reports · 2024-03-13

## TL;DR

This study identifies the most stable reference genes for gene expression analysis in Spodoptera litura under different microbial pesticide treatments.

## Contribution

The study provides experimentally validated reference genes for qRT-PCR normalization in S. litura under pesticide stress.

## Key findings

- RPLP0 and ACT5C are the best reference genes for direct pesticide treatment.
- RPS13 and GAPDH are most stable for comprehensive treatment conditions.
- RPS13 and RPLP0 are the most reliable across all treatment types.

## Abstract

Quantitative real-time polymerase chain reaction (qRT-PCR) has become a commonly used method for the quantification of gene expression. However, accurate qRT-PCR analysis requires a valid internal reference for data normalization. To determine the valid reference characterized with low expression variability among Spodoptera litura samples after microbial pesticide treatments, nine housekeeping genes, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), arginine kinase, ubiquitin C, actin-5C (ACT5C), actin, ribosomal protein S13 (RPS13), tubulin, acidic ribosomal protein P0 (RPLP0) and ubiquinol-cytochrome c reductase, were evaluated for their suitability using geNorm, Normfinder, BestKeeper, RefFinder and the comparative delta CT methods in this study. S. litura larvae after direct treatment (larvae were immersed in biopesticides), indirect treatment (larvae were fed with biopesticide immersed artificial diets) and comprehensive treatment (larvae were treated with the first two treatments in sequence), respectively with Metarhizium anisopliae, Empedobacter brevis and Bacillus thuringiensis, were investigated. The results indicated that the best sets of internal references were as follows: RPLP0 and ACT5C for direct treatment conditions; RPLP0 and RPS13 for indirect treatment conditions; RPS13 and GAPDH for comprehensive treatment conditions; RPS13 and RPLP0 for all the samples. These results provide valuable bases for further genetic researches in S. litura.

## Linked entities

- **Genes:** GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597], Act5C (Actin 5C) [NCBI Gene 31521], Act5C (Actin 5C) [NCBI Gene 31521], ACTIN (hypothetical protein) [NCBI Gene 8244030], RPS13A (ribosomal protein S13A) [NCBI Gene 828167], RPS13 (ribosomal protein S13) [NCBI Gene 6207], gammaTub23C (gamma-Tubulin at 23C) [NCBI Gene 33501], RPLP0 (ribosomal protein lateral stalk subunit P0) [NCBI Gene 6175]
- **Species:** Spodoptera litura (taxon 69820), Metarhizium anisopliae (taxon 5530), Empedobacter brevis (taxon 247), Bacillus thuringiensis (taxon 1428)

## Full-text entities

- **Species:** Bacillus thuringiensis (species) [taxon 1428], Metarhizium anisopliae (species) [taxon 5530], Spodoptera litura (species) [taxon 69820], Empedobacter brevis (species) [taxon 247]
- **Mutations:** ACT5C

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC10937984/full.md

## References

63 references — full list in the complete paper: https://tomesphere.com/paper/PMC10937984/full.md

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Source: https://tomesphere.com/paper/PMC10937984