# Pip5k1γ regulates axon formation by limiting Rap1 activity

**Authors:** Danila Di Meo, Trisha Kundu, Priyadarshini Ravindran, Bhavin Shah, Andreas W Püschel

PMC · DOI: 10.26508/lsa.202302383 · 2024-03-04

## TL;DR

Pip5k1γ helps neurons form a single axon by controlling Rap1 activity, and disrupting it leads to extra axons.

## Contribution

Pip5k1γ is identified as a negative feedback regulator of axon formation through its regulation of Rap1 activity.

## Key findings

- Disrupting Pip5k1γ or altering membrane tension increases Rap1 activity and causes extra axon formation.
- PI(4,5)P2 generated by Pip5k1γ limits C3G and Rap1 activity to ensure a single axon forms.
- Constitutively active Pip5k reverses supernumerary axon formation caused by Pip5k1γ disruption.

## Abstract

Pip5k1γ is shown to regulate axon formation as a negative feedback signal. Impairing its function or manipulating membrane tension by osmotic shock induces the formation of supernumerary axons by hyper-activation of C3G and Rap1.

During their differentiation, neurons establish a highly polarized morphology by forming axons and dendrites. Cortical and hippocampal neurons initially extend several short neurites that all have the potential to become an axon. One of these neurites is then selected as the axon by a combination of positive and negative feedback signals that promote axon formation and prevent the remaining neurites from developing into axons. Here, we show that Pip5k1γ is required for the formation of a single axon as a negative feedback signal that regulates C3G and Rap1 through the generation of phosphatidylinositol-4,5-bisphosphate (PI(4,5)P2). Impairing the function of Pip5k1γ results in a hyper-activation of the Fyn/C3G/Rap1 pathway, which induces the formation of supernumerary axons. Application of a hyper-osmotic shock to modulate membrane tension has a similar effect, increasing Rap1 activity and inducing the formation of supernumerary axons. In both cases, the induction of supernumerary axons can be reverted by expressing constitutively active Pip5k. Our results show that PI(4,5)P2-dependent membrane properties limit the activity of C3G and Rap1 to ensure the extension of a single axon.

## Linked entities

- **Genes:** RAPGEF1 (Rap guanine nucleotide exchange factor 1) [NCBI Gene 2889], RAP1A (RAP1A, member of RAS oncogene family) [NCBI Gene 5906], FYN (FYN proto-oncogene, Src family tyrosine kinase) [NCBI Gene 2534]
- **Proteins:** RAPGEF1 (Rap guanine nucleotide exchange factor 1), RAP1A (RAP1A, member of RAS oncogene family), FYN (FYN proto-oncogene, Src family tyrosine kinase)

## Full-text entities

- **Genes:** RAPGEF1 (Rap guanine nucleotide exchange factor 1) [NCBI Gene 2889] {aka C3G, GRF2}, RAP1A (RAP1A, member of RAS oncogene family) [NCBI Gene 5906] {aka C21KG, G-22K, KREV-1, KREV1, RAP1, SMGP21}, PIKFYVE (phosphoinositide kinase, FYVE-type zinc finger containing) [NCBI Gene 200576] {aka FAB1, HEL37, PIP5K, PIP5K3, ZFYVE29}, PIP5K1C (phosphatidylinositol-4-phosphate 5-kinase type 1 gamma) [NCBI Gene 23396] {aka LCCS3, PIP5K-GAMMA, PIP5K1-gamma, PIP5Kgamma}, FYN (FYN proto-oncogene, Src family tyrosine kinase) [NCBI Gene 2534] {aka SLK, SYN, p59-FYN}
- **Chemicals:** PI(4,5)P2 (-), phosphatidylinositol-4,5-bisphosphate (MESH:D019269)

## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/PMC10912816/full.md

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Source: https://tomesphere.com/paper/PMC10912816