# DNA Hyperstructure

**Authors:** Gloria Elena León-Paz-de-Rodríguez, Ericka Rodríguez-León, Ramón Iñiguez-Palomares

PMC · DOI: 10.1021/acsomega.3c07379 · 2024-02-12

## TL;DR

This study introduces a method to create DNA hyperstructures on glass slides, which can be used for disease detection and early gender determination in gestational products.

## Contribution

A novel procedure for DNA precipitation and self-assembly into hyperstructures for visualization and diagnostic applications.

## Key findings

- DNA hyperstructures form autonomously on glass slides under controlled precipitation conditions.
- Distinct hyperstructure patterns were observed in healthy individuals versus those with medical conditions.
- The method works with DNA from various sources, including human blood and viruses.

## Abstract

This study presents
a new procedure to condense DNA molecules and
precipitate them onto a glass slide. The resulting DNA molecules undergo
autonomous self-assembly, creating closed superstructures on the micrometer
scale, which are called DNA hyperstructures. These structures can
be observed using low-magnification (4×) light microscopy. Precisely
controlling the alcohol/glacial acetic acid ratio and DNA concentration
during precipitation enabled the regulation of structure compaction
on the slide. The alcohol/glacial acetic acid ratio is inversely proportional
to the DNA concentration to achieve optimal compaction on the slide.
Confocal microscopy fluorescence analysis of DNA extracts stained
with DAPI shows that nucleic acids self-assemble to form structures
during precipitation on the slide. This methodology is relevant since
it facilitates the precipitation and visualization of DNA, regardless
of its origin or molecular weight. To confirm its versatility, results
with DNA extracted from human peripheral blood, the Lambda virus,
and plasmid pBR322 are presented. The study examined the morphological
features of DNA hyperstructures in both healthy individuals and those
diagnosed with different medical conditions or illnesses, revealing
distinct patterns specific to each case. This innovative technology
has potential for disease detection in peripheral blood samples, ranging
from cancer and Alzheimer’s disease to determining the gender
of the gestational product at an early stage.

## Linked entities

- **Chemicals:** alcohol (PubChem CID 702), glacial acetic acid (PubChem CID 176), DAPI (PubChem CID 2954)
- **Diseases:** cancer (MONDO:0004992), Alzheimer’s disease (MONDO:0004975)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Diseases:** DNA Hyperstructure (MESH:D004266), cancer (MESH:D009369), Alzheimer's disease (MESH:D000544)
- **Species:** Homo sapiens (human, species) [taxon 9606], Lambdavirus (genus) [taxon 186765]

## Figures

20 figures with captions in the complete paper: https://tomesphere.com/paper/PMC10905968/full.md

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Source: https://tomesphere.com/paper/PMC10905968