# Cohesin loss and MLL-AF9 are not synthetic lethal in murine hematopoietic stem and progenitor cells

**Authors:** Alison Meyer, Cary Stelloh, Nan Zhu, Sridhar Rao

PMC · DOI: 10.21203/rs.3.rs-3894962/v1 · Research Square · 2024-01-29

## TL;DR

The study found that cohesin loss and MLL-AF9 mutations do not work together to kill hematopoietic cells, suggesting they share a common mechanism.

## Contribution

The paper challenges the assumption of synthetic lethality between cohesin mutations and MLL-AF9 in leukemia cells.

## Key findings

- Cohesin subunit loss had minimal impact on MLL-AF9-expressing cells' self-renewal.
- Cohesin and MLL fusion mutations may share a mechanism through HOXA gene upregulation.
- Lack of cohesin mutations in MLL-rearranged leukemias may reflect shared mechanisms, not synthetic lethality.

## Abstract

Objective
As cohesin mutations are rarely found in MLL-rearranged acute myeloid leukemias, we investigated the potential synthetic lethality between cohesin mutations and MLL-AF9 using murine hematopoietic stem and progenitor cells.
Results
Contrary to our hypothesis, a complete loss of
Stag2
or haploinsufficiency of
Smc3
were well tolerated in MLL-AF9-expressing hematopoietic stem and progenitor cells. Minimal effect of cohesin subunit loss on the
in vitro
self-renewal of MLL-AF9-expressing cells was observed. Despite the differing mutational landscapes of cohesin-mutated and MLL fusion AMLs, previous studies showed that cohesin and MLL fusion mutations similarly drive abnormal self-renewal through
HOXA
gene upregulation. The utilization of a similar mechanism suggests that little selective pressure exists for the acquisition of cohesin mutations in AMLs expressing MLL fusions, explaining their lack of co-occurrence. Our results emphasize the importance of using genetic models to test suspected synthetic lethality and suggest that a lack of co-occurrence may instead point to a common mechanism of action between two mutations.

## Linked entities

- **Genes:** STAG2 (STAG2 cohesin complex component) [NCBI Gene 10735], SMC3 (structural maintenance of chromosomes 3) [NCBI Gene 9126], HOXA@ (homeobox A cluster) [NCBI Gene 3197]

## Full-text entities

- **Genes:** Hoxa (homeobox A cluster) [NCBI Gene 111336] {aka Hox-1}, Kmt2a (lysine (K)-specific methyltransferase 2A) [NCBI Gene 214162] {aka 6430520K01, ALL-1, All1, Cxxc7, HRX, HTRX1}, Smc3 (structural maintenance of chromosomes 3) [NCBI Gene 13006] {aka Bamacan, Cspg6, HCAP, Mmip1, SMC-3, SmcD}, Stag2 (STAG2 cohesin complex component) [NCBI Gene 20843] {aka 9230105L23Rik, B230112I07Rik, SA-2, SAP2}
- **Diseases:** acute myeloid leukemias (MESH:D015470)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

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Source: https://tomesphere.com/paper/PMC10862952