# Analysis of two sequential SARS-CoV-2 outbreaks on a haematology-oncology ward and the role of infection prevention

**Authors:** W.C. van der Zwet, E.A. Klomp-Berens, A.M.P. Demandt, J. Dingemans, B.M.J.W. van der Veer, L.B. van Alphen, J.A.M.C. Dirks, P.H.M. Savelkoul

PMC · DOI: 10.1016/j.infpip.2023.100335 · Infection Prevention in Practice · 2024-01-06

## TL;DR

The paper examines two SARS-CoV-2 outbreaks in a hospital's haematology ward and evaluates how infection control measures and vaccination affected transmission and outcomes.

## Contribution

The study provides insights into the effectiveness of infection prevention strategies and vaccination in controlling SARS-CoV-2 outbreaks in immunocompromised patient settings.

## Key findings

- Strict infection control measures reduced transmission during the first outbreak but not completely.
- Vaccination significantly mitigated the severity of the second outbreak.
- The Omicron variant spread in shared rooms despite enhanced precautions.

## Abstract

Two SARS-CoV-2 nosocomial outbreaks occurred on the haematology ward of our hospital. Patients on the ward were at high risk for severe infection because of their immunocompromised status. Whole Genome Sequencing proved transmission of a particular SARS-CoV-2 variant in each outbreak. The first outbreak (20 patients/31 healthcare workers (HCW)) occurred in November 2020 and was caused by a variant belonging to lineage B.1.221. At that time, there were still uncertainties on mode of transmission of SARS-CoV-2, and vaccines nor therapy were available. Despite HCW wearing II-R masks in all patient contacts and FFP-2 masks during aerosol generating procedures (AGP), the outbreak continued. Therefore, extra measures were introduced. Firstly, regular PCR-screening of asymptomatic patients and HCW; positive patients were isolated and positive HCW were excluded from work as a rule and they were only allowed to resume their work if a follow-up PCR CT-value was ≥30 and were asymptomatic or having only mild symptoms. Secondly, the use of FFP-2 masks was expanded to some long-lasting, close-contact, non-AGPs. After implementing these measures, the incidence of new cases declined gradually. Thirty-seven percent of patients died due to COVID-19.

The second outbreak (10 patients/2 HCW) was caused by the highly transmissible omicron BA.1 variant and occurred in February 2022, where transmission occurred on shared rooms despite the extra infection control measures. It was controlled much faster, and the clinical impact was low as the majority of patients was vaccinated; no patients died and symptoms were relatively mild in both patients and HCW.

## Linked entities

- **Diseases:** SARS-CoV-2 (MONDO:0100096), COVID-19 (MONDO:0100096)

## Full-text entities

- **Genes:** APRT (adenine phosphoribosyltransferase) [NCBI Gene 353] {aka AMP, APRTD}
- **Diseases:** HCW (MESH:D003428), died (MESH:D003643), respiratory infection (MESH:D012141), AGP (MESH:D000073818), COVID-19 (MESH:D000086382), haematological malignancies (MESH:D009369), respiratory symptoms (MESH:D012818), Influenza (MESH:D007251), infection (MESH:D007239), type-II-R (MESH:C580424), long-COVID symptoms (MESH:D000094024)
- **Chemicals:** water (MESH:D014867), FFP-2 (-), NA (MESH:D012964)
- **Species:** Homo sapiens (human, species) [taxon 9606], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049]
- **Mutations:** A26513G, T478K

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC10826166/full.md

## References

32 references — full list in the complete paper: https://tomesphere.com/paper/PMC10826166/full.md

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Source: https://tomesphere.com/paper/PMC10826166