# Unraveling the multiplicity of geranylgeranyl reductases in Archaea: potential roles in saturation of terpenoids

**Authors:** Alka Rao, Arnold J. M. Driessen

PMC · DOI: 10.1007/s00792-023-01330-2 · Extremophiles · 2024-01-27

## TL;DR

This paper explores the role of geranylgeranyl reductases in Archaea and their potential impact on the saturation of membrane polyterpenes.

## Contribution

The study investigates the diversity and potential functions of geranylgeranyl reductase paralogs in Archaea.

## Key findings

- Geranylgeranyl reductases are linked to the saturation of polyterpenes in Archaea.
- The genomic loci and structure of geranylgeranyl reductase paralogs correlate with membrane polyterpene diversity.

## Abstract

The enzymology of the key steps in the archaeal phospholipid biosynthetic pathway has been elucidated in recent years. In contrast, the complete biosynthetic pathways for proposed membrane regulators consisting of polyterpenes, such as carotenoids, respiratory quinones, and polyprenols remain unknown. Notably, the multiplicity of geranylgeranyl reductases (GGRs) in archaeal genomes has been correlated with the saturation of polyterpenes. Although GGRs, which are responsible for saturation of the isoprene chains of phospholipids, have been identified and studied in detail, there is little information regarding the structure and function of the paralogs. Here, we discuss the diversity of archaeal membrane-associated polyterpenes which is correlated with the genomic loci, structural and sequence-based analyses of GGR paralogs.

## Linked entities

- **Species:** Archaea (taxon 2157)

## Full-text entities

- **Genes:** S-adenosylmethionine decarboxylase [NCBI Gene 26608572], ferredoxin [NCBI Gene 26609998], PSY [NCBI Gene 26608198], GCGR (glucagon receptor) [NCBI Gene 2642] {aka GGR, GL-R, MVAH}, GGPPS [NCBI Gene 26609791]
- **Diseases:** AF_PR (MESH:D008151), DGDs (OMIM:307030), GGPP (MESH:C563162), DGGGPS (MESH:D020165), T. kodakarensis (MESH:D001260), DoIP (MESH:C563666)
- **Chemicals:** phospholipid (MESH:D010743), galactose (MESH:D005690), oxygen (MESH:D010100), fatty acid (MESH:D005227), succinate (MESH:D019802), glycolipids (MESH:D006017), geranylgeraniol (MESH:C017338), caldarchaeol (MESH:C094418), tryptophan (MESH:D014364), cysteine (MESH:D003545), isoprene (MESH:C005059), tyrosine (MESH:D014443), salt (MESH:D012492), isoprenoid (MESH:D013729), NAD (MESH:D009243), hydrocarbon (MESH:D006838), DoIP (MESH:D004288), squalane (MESH:C019556), FPP (MESH:C004808), farnesol (MESH:D005204), mevalonate (MESH:D008798), quinones (MESH:D011809), sulfur (MESH:D013455), cyclopentane (MESH:D003517), MK-7 (MESH:C062629), formate (MESH:C030544), BRs (MESH:C002951), polyprenols (MESH:D000081026), C35, C40 lycopene (-), ester (MESH:D004952), NADP (MESH:D009249), FAD (MESH:D005182), water (MESH:D014867), H+ (MESH:D006859), CLs (MESH:D002308), Sodium dithionite (MESH:D004227), serine (MESH:D012694), NaCl (MESH:D012965), carotenoid (MESH:D002338), Glycerol-1-phosphate (MESH:C029620), quinone (MESH:C004532), lycopene (MESH:D000077276), flavin (MESH:C024132), GGPP (MESH:C002963), CTP (MESH:D003570), CQ (MESH:C014380), sulfoquinovose (MESH:C009358), squalene (MESH:D013185), CH4 (MESH:D008697), C (MESH:D002244), glycerol (MESH:D005990), F420 (MESH:C007701), IPP (MESH:C004809), AA (MESH:D000596), GDNTs (MESH:C085775), thermoplasmaquinone (MESH:C422476), phenylalanine (MESH:D010649), phosphate (MESH:D010710), Lipid (MESH:D008055), phytoene (MESH:C100185)
- **Species:** Halobacterium salinarum (species) [taxon 2242], Halohasta litchfieldiae (species) [taxon 1073996], Methanothermobacter thermautotrophicus (species) [taxon 145262], Thermococcus kodakarensis (species) [taxon 311400], Thermoplasma volcanium (species) [taxon 50339], Methanopyrus kandleri (species) [taxon 2320], Desulfurococcales (order) [taxon 114380], Halorubrum lacusprofundi (species) [taxon 2247], Archaeoglobus fulgidus (species) [taxon 2234], Haloferax mediterranei (species) [taxon 2252], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Fibrobacteria (class) [taxon 204430], Saccharolobus shibatae (species) [taxon 2286], Thermoproteus tenax (species) [taxon 2271], Aeropyrum pernix (species) [taxon 56636], Mycolicibacterium vanbaalenii [taxon 110539], Thermotoga maritima (species) [taxon 2336], Methanothermobacter marburgensis (species) [taxon 145263], Haloferax volcanii (species) [taxon 2246], Thermoproteales (order) [taxon 2266], Escherichia coli (E. coli, species) [taxon 562], Saccharolobus islandicus (species) [taxon 43080], Thermococcus sp. (species) [taxon 35749], Natronomonas pharaonis (species) [taxon 2257], Methanosarcina acetivorans (species) [taxon 2214], Kobuvirus bejaponia (species) [taxon 194965], Desulfurococcus amylolyticus (species) [taxon 94694], Thermococcus barophilus (species) [taxon 55802], Sulfolobus acidocaldarius (species) [taxon 2285], Thermoplasma acidophilum (species) [taxon 2303], Sulfolobales (order) [taxon 2281], Methanococcus maripaludis (species) [taxon 39152], Haloferax sulfurifontis (species) [taxon 255616], Halobaculum gomorrense (species) [taxon 43928], Pyrobaculum ferrireducens (species) [taxon 1104324], Methanococcoides burtonii (species) [taxon 29291]

## Full text

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## Figures

15 figures with captions in the complete paper: https://tomesphere.com/paper/PMC10821996/full.md

## References

138 references — full list in the complete paper: https://tomesphere.com/paper/PMC10821996/full.md

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Source: https://tomesphere.com/paper/PMC10821996