# The Cell Envelope Integrity Protein Homologue D0Y85_RS06240 of Stenotrophomonas Confers Multiantibiotic Resistance

**Authors:** Chuanqing Zhong, Xiaoqiang Deng, Aihua Jiang, Yayu Liu, Yuanyuan Liu, Jiafang Fu, Guangxiang Cao

PMC · DOI: 10.1155/2024/7547514 · The Canadian Journal of Infectious Diseases & Medical Microbiology = Journal Canadien des Maladies Infectieuses et de la Microbiologie Médicale · 2024-01-20

## TL;DR

This study shows that a protein from Stenotrophomonas helps bacteria resist multiple antibiotics, offering new insights into antibiotic resistance mechanisms.

## Contribution

The study identifies D0Y85_RS06240 as a novel cell envelope protein linked to multiantibiotic resistance in Stenotrophomonas.

## Key findings

- D0Y85_RS06240 heterologous expression in E. coli conferred resistance to colistin, tetracycline, and cefixime.
- Efflux pump inhibitor NMP reduced antibiotic resistance and enhanced tetracycline's bactericidal effect.
- Molecular docking confirmed D0Y85_RS06240's ability to bind multiple antibiotics.

## Abstract

The potential role of cell envelope integrity proteins in mediating antibiotic resistance is not well understood. In this study, we investigated whether the cell envelope integrity protein D0Y85_RS06240 from the multiantibiotic resistant strain Stenotrophomonas sp. G4 mediates antibiotic resistance.

Bioinformatics analysis was conducted to identify proteins related to the D0Y85_RS06240 protein. The D0Y85_RS06240 gene was heterologously expressed in Escherichia coli, both antibiotic MICs and the effect of efflux pump inhibitors on antibiotic MICs were determined by the broth microdilution method. A combination of antibiotic and efflux pump inhibitor was used to investigate bacterial killing kinetics, and binding of D0Y85_RS06240 to antibiotic molecules was predicted by molecular docking analysis.

Sequence homology analysis revealed that D0Y85_RS06240 was related to cell envelope integrity proteins. The D0Y85_RS06240 heterologous expression strains were resistant to multiple antibiotics, including colistin, tetracycline, and cefixime. However, the efflux pump inhibitor N-methylpyrrolidone (NMP) reduced the antibiotic MICs of the D0Y85_RS06240 heterologous expression strain, and bacterial killing kinetics revealed that NMP enhanced the bactericidal rate of tetracycline to the drug-resistant bacteria. Molecular docking analysis indicated that D0Y85_RS06240 could bind colistin, tetracycline, and cefixime.

The cell envelope integrity protein D0Y85_RS06240 in Stenotrophomonas sp. G4 mediates multiantibiotic resistance. This study lays the foundation for an in-depth analysis of D0Y85_RS06240-mediated antibiotic resistance mechanisms and the use of D0Y85_RS06240 as a target for the treatment of multiantibiotic-resistant bacterial infections.

## Linked entities

- **Chemicals:** colistin (PubChem CID 5311054), tetracycline (PubChem CID 54675776), cefixime (PubChem CID 5362065), N-methylpyrrolidone (PubChem CID 13387), NMP (PubChem CID 13387)
- **Species:** Stenotrophomonas sp. G4 (taxon 2303750), Escherichia coli (taxon 562)

## Full-text entities

- **Genes:** creD (hypothetical protein) [NCBI Gene 881586]
- **Diseases:** bacterial (MESH:D001424), nosocomial infections (MESH:D003428)
- **Chemicals:** VER (MESH:D014700), kanamycin (MESH:D007612), RES (MESH:D012110), ciprofloxacin (MESH:D002939), agarose (MESH:D012685), florfenicol (MESH:C035534), cefixime (MESH:D020682), N-methylpyrrolidone (MESH:C038678), COM (-), arsenite (MESH:C015001), beta-lactam (MESH:D047090), sulfonamide (MESH:D013449), CCCP (MESH:C070053), meropenem (MESH:D000077731), Tetracycline (MESH:D013752)
- **Species:** Stenotrophomonas maltophilia (species) [taxon 40324], Pseudomonas aeruginosa (species) [taxon 287], Escherichia coli (E. coli, species) [taxon 562], Burkholderia multivorans (species) [taxon 87883], Stenotrophomonas sp. (species) [taxon 69392], Pseudomonas aeruginosa PAO1 (strain) [taxon 208964], Homo sapiens (human, species) [taxon 9606], Escherichia coli DH5[alpha] (strain) [taxon 668369]
- **Mutations:** P06240-R, P06240
- **Cell lines:** DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531)

## Full text

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## Figures

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## References

25 references — full list in the complete paper: https://tomesphere.com/paper/PMC10821804/full.md

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Source: https://tomesphere.com/paper/PMC10821804