# Two decades of population genomics: will we ever agree on bacterial species?

**Authors:** William P. Hanage

PMC · DOI: 10.1186/s12915-023-01797-7 · BMC Biology · 2024-01-26

## TL;DR

This paper explores how advances in gene sequencing have improved our understanding of pathogen variation, but highlights challenges in using large genetic databases.

## Contribution

The paper reviews progress in population genomics and identifies ongoing challenges in interpreting large-scale genetic data.

## Key findings

- Gene and genome sequencing has significantly advanced understanding of pathogen variation.
- Large genetic databases present new challenges for the field of population genomics.

## Abstract

We have never known more about the genetic variation that characterizes life on earth, which is stored in ever-growing databases, many of which are publicly accessible. Yet, an accessible database does not mean that information is readily usable or interpretable. Here, I consider how the last two decades of gene and genome sequencing have advanced our understanding specifically of pathogen variation and how the field might be revolutionized all over again — provided we are able to solve the challenges that have become evident as with the size of our databases.

## Full-text entities

- **Diseases:** infections (MESH:D007239)
- **Chemicals:** water (MESH:D014867), ice (MESH:D007053)
- **Species:** Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Homo sapiens (human, species) [taxon 9606]

## Full text

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## References

8 references — full list in the complete paper: https://tomesphere.com/paper/PMC10821237/full.md

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Source: https://tomesphere.com/paper/PMC10821237