How nature discovers rare Turing islands: exploration by common limit cycles
Seyoon Kim, Antonio Matas-Gil, Robert G. Endres

TL;DR
This paper proposes that biological limit cycles can serve as natural explorers of Turing space, enabling the emergence of spatial patterns without fine-tuning, thus explaining how complex structures develop reliably.
Contribution
It introduces a mechanism where biochemical limit cycles dynamically explore Turing regimes, enhancing pattern formation robustness and reproducibility in biological systems.
Findings
Limit cycles can sweep through Turing-permissive regimes to generate patterns.
Coupling to gradients increases pattern reproducibility.
Entropy measures quantify pattern formation and robustness.
Abstract
Turing patterns are a cornerstone of biological self-organization, yet their emergence typically requires finely tuned parameters occupying narrow regions of high-dimensional space. This poses a fundamental challenge: how can evolving biological systems reliably find and exploit such rare conditions? In this work, we propose that common biochemical limit cycles, such as those arising from genetic feedback loops, can act as natural explorers of Turing space. By coupling a reaction-diffusion system to an orbit that modulates some of its parameters, we show that the system can dynamically sweep through Turing-permissive regimes and generate transient spatial patterns. We use an entropy-based measure in Fourier space to quantify pattern formation and demonstrate how cycles enhance the detectability and robustness of Turing islands. We further explore how coupling to positional gradients…
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