TRAS: An Interactive Software for Tracing Tree Ring Cross Sections

TL;DR

TRAS is an open-source software that automates and refines the detection and measurement of tree rings in cross-sectional images, improving efficiency and accuracy in dendrochronology.

Contribution

It introduces a multi-algorithm approach combining classical and deep learning methods for automatic tree ring detection with a user-friendly interface.

Findings

DeepCS-TRD achieved an F-score of 81.0% in detection.

Automatic detection reduced manual correction to about 20%.

Ring-width measurements showed over 0.99 correlation with manual methods.

Abstract

Tree ring marking remains a key step in dendrometry and dendrochronology, but it is often performed manually, making the process time-consuming, subjective, and difficult to scale to large image datasets. We present the Tree Ring Analyzer Suite (TRAS), an open-source graphical software for automatic delineation, manual correction, and measurement of tree rings in wood cross-sectional images. TRAS integrates three complementary detection algorithms: the classical image-processing method CS-TRD and two deep-learning approaches, DeepCS-TRD and INBD. The interface allows users to refine automatic detections, remove false positives, and manually add missing rings. It also computes dendrochronological metrics such as earlywood and latewood areas, ring perimeter, equivalent ring width, and custom path-based ring-width measurements. TRAS was evaluated on 18 expertly annotated Pinus taeda L. cross-section images. DeepCS-TRD achieved the best automatic detection performance, with an F-score of 81.0% and precision of 86.4%. Automatic detection reduced the required manual correction effort to approximately 20% of ring boundaries. For one-dimensional ring-width measurements, TRAS showed excellent agreement with CooRecorder ($r > 0.99$). Common detection errors, such as jump propagation or false positives near knots, were easily corrected through the postprocessing interface. TRAS provides a flexible and reproducible solution for tree-ring analysis on Windows, macOS, and Linux. Code is available at the https://hmarichal93.github.io/tras.