Guideline2Graph: Profile-Aware Multimodal Parsing for Executable Clinical Decision Graphs
Onur Selim Kilic, Yeti Z. Gurbuz, Cem O. Yaldiz, Afra Nawar, Etrit Haxholli, Ogul Can, and Eli Waxman

TL;DR
This paper introduces a decomposition-first pipeline for converting complex clinical guidelines into executable decision graphs, significantly improving accuracy and continuity over existing methods.
Contribution
It proposes a novel, topology-aware, decomposition-based approach that preserves cross-page control flow and auditability in clinical decision graph generation.
Findings
Edge and triplet precision/recall improved from 19.6%/16.1% to 69.0%/87.5%.
Node recall increased from 78.1% to 93.8%.
Supports more accurate, auditable guideline-to-CDS conversion.
Abstract
Clinical practice guidelines are long, multimodal documents whose branching recommendations are difficult to convert into executable clinical decision support (CDS), and one-shot parsing often breaks cross-page continuity. Recent LLM/VLM extractors are mostly local or text-centric, under-specifying section interfaces and failing to consolidate cross-page control flow across full documents into one coherent decision graph. We present a decomposition-first pipeline that converts full-guideline evidence into an executable clinical decision graph through topology-aware chunking, interface-constrained chunk graph generation, and provenance-preserving global aggregation. Rather than relying on single-pass generation, the pipeline uses explicit entry/terminal interfaces and semantic deduplication to preserve cross-page continuity while keeping the induced control flow auditable and…
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